Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G35020
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G31070 AT2G35020 | 2 |  |
| Tree-based ortholog | AT1G31070 AT2G35020 | 2 | ||
| Anchor point | AT1G31070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G35020 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00032G02730 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00032G02730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00032G02730 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G32570 AL4G20330 | 2 | |
| Tree-based ortholog | many-to-many | AL1G32570 AL4G20330 | 2 | ||
| Anchor point | 1-to-many | AL1G32570 AL4G20330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G20330 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G11960 | 1 | |
| Tree-based ortholog | many-to-1 | BV7G11960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G11960 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G09590 BR08G09740 BR09G27590 | 3 | |
| Tree-based ortholog | many-to-many | BR09G27590 BR08G09740 BR05G09590 | 3 | ||
| Anchor point | 1-to-many | BR09G27590 BR05G09590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G09590 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G28130 CRU_004G16140 | 2 | |
| Tree-based ortholog | many-to-many | CRU_001G28130 CRU_004G16140 | 2 | ||
| Anchor point | 1-to-many | CRU_004G16140 CRU_001G28130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G16140 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00030G01180 | 1 | |
| Tree-based ortholog | many-to-1 | CP00030G01180 | 1 | ||
| Anchor point | 1-to-1 | CP00030G01180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00030G01180 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR07G07880 | 1 | |
| Tree-based ortholog | many-to-many | CR16G00060 CR07G07880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G07880 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G25710 | 1 | |
| Tree-based ortholog | many-to-1 | CL01G25710 | 1 | ||
| Anchor point | 1-to-1 | CL01G25710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G25710 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00008G01890 | 1 | |
| Tree-based ortholog | many-to-1 | CS00008G01890 | 1 | ||
| Anchor point | 1-to-1 | CS00008G01890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00008G01890 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00007G00340 | 1 | |
| Tree-based ortholog | many-to-1 | CM00007G00340 | 1 | ||
| Anchor point | 1-to-1 | CM00007G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G00340 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G32590 | 1 | |
| Tree-based ortholog | many-to-1 | EG0005G32590 | 1 | ||
| Anchor point | 1-to-1 | EG0005G32590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G32590 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV3G11120 | 1 | |
| Tree-based ortholog | many-to-1 | FV3G11120 | 1 | ||
| Anchor point | 1-to-1 | FV3G11120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G11120 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM05G26240 GM08G09170 | 2 | |
| Tree-based ortholog | many-to-many | GM10G12915 GM18G36951 GM12G15971 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G09170 GM05G26240 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G26830 GR08G04980 | 2 | |
| Tree-based ortholog | many-to-many | GR08G04980 GR05G26830 | 2 | ||
| Anchor point | 1-to-1 | GR08G04980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G04980 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G003470 | 1 | |
| Tree-based ortholog | many-to-1 | LJ4G003600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G003470 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G046900 MD00G051540 | 2 | |
| Tree-based ortholog | many-to-many | MD00G046900 MD00G051540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G051540 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME12147G00050 | 1 | |
| Tree-based ortholog | many-to-1 | ME12147G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12147G00050 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT4G094668 | 1 | |
| Tree-based ortholog | many-to-1 | MT4G094668 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G094668 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G52370 OS08G10600 | 2 | |
| Tree-based ortholog | many-to-many | OS08G10600 OS04G52370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G10600 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL11G03190 | 1 | |
| Tree-based ortholog | many-to-1 | OL11G03190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G03190 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00013G01020 PP00104G00670 | 2 | |
| Tree-based ortholog | many-to-1 | PP00013G01020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00013G01020 PP00104G00670 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G15970 PT03G07470 | 2 | |
| Tree-based ortholog | many-to-many | PT01G15970 PT03G07470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G07470 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_004G10950 | 1 | |
| Tree-based ortholog | many-to-many | PPE_004G33080 PPE_004G10950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G10950 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC27704G00090 | 1 | |
| Tree-based ortholog | many-to-1 | RC27704G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27704G00090 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G068530 | 1 | |
| Tree-based ortholog | many-to-1 | SL02G068530 | 1 | ||
| Anchor point | 1-to-1 | SL02G068530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G068530 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G014650 | 1 | |
| Tree-based ortholog | many-to-1 | ST02G014650 | 1 | ||
| Anchor point | 1-to-1 | ST02G014650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G014650 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G26910 TP4G17300 | 2 | |
| Tree-based ortholog | many-to-many | TP1G26910 TP4G17300 | 2 | ||
| Anchor point | 1-to-many | TP1G26910 TP4G17300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G17300 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G00540 | 1 | |
| Tree-based ortholog | many-to-1 | TC0002G00540 | 1 | ||
| Anchor point | 1-to-1 | TC0002G00540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G00540 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV01G09590 | 1 | |
| Tree-based ortholog | many-to-many | VV01G09590 VV00G15250 | 2 | ||
| Anchor point | 1-to-1 | VV01G09590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G09590 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G04660 ZM10G08200 ZM10G23820 | 3 | |
| Tree-based ortholog | many-to-many | ZM10G08200 ZM02G04660 ZM10G23820 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G23820 ZM02G04660 | 2 |