Integrative Orthology Viewer: AT2G30470 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G30470 AT4G32010 | 2 | |
Tree-based ortholog | AT2G30470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G30470 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G03730 ATR_00077G00640 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00077G00640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00077G00640 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G15100 AL7G09510 | 2 | |
Tree-based ortholog | 1-to-1 | AL4G15100 | 1 | ||
Anchor point | N/A | AL4G15100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G15100 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G51750 BV7G08280 BV7G09730 | 3 | |
Tree-based ortholog | 1-to-1 | BV7G08280 | 1 | ||
Anchor point | N/A | BV7G08280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G08280 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G15340 BR03G52670 BR04G17740 ... | 4 | |
Tree-based ortholog | 1-to-many | BR03G15340 BR05G13270 | 2 | ||
Anchor point | N/A | BR03G15340 BR04G17740 BR05G13270 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G15340 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G11300 CRU_007G08100 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_004G11300 | 1 | ||
Anchor point | N/A | CRU_004G11300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G11300 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00000G00830 CP00002G02790 CP33243G00010 | 3 | |
Tree-based ortholog | 1-to-1 | CP00002G02790 | 1 | ||
Anchor point | N/A | CP00002G02790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00002G02790 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR13G00150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G00150 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G22860 CL03G00090 CL10G20640 | 3 | |
Tree-based ortholog | 1-to-1 | CL03G00090 | 1 | ||
Anchor point | N/A | CL03G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G00090 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00010G02380 CS01091G00010 | 2 | |
Tree-based ortholog | 1-to-1 | CS01091G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00036G00070 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G03340 CM00011G00140 CM00044G00110 | 3 | |
Tree-based ortholog | 1-to-1 | CM00044G00110 | 1 | ||
Anchor point | N/A | CM00044G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G00140 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G33980 EG0005G26200 EG0006G22360 | 3 | |
Tree-based ortholog | 1-to-1 | EG0002G33980 | 1 | ||
Anchor point | N/A | EG0002G33980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G33980 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G07010 FV3G31260 FV6G08680 | 3 | |
Tree-based ortholog | 1-to-1 | FV3G31260 | 1 | ||
Anchor point | N/A | FV6G08680 FV3G31260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G08680 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G40280 GM13G31970 GM14G38492 ... | 5 | |
Tree-based ortholog | 1-to-many | GM11G31234 GM18G05840 GM14G38492 ... | 4 | ||
Anchor point | N/A | GM01G32810 GM18G05840 GM02G40280 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G31234 GM18G05840 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G17310 GR11G02240 | 2 | |
Tree-based ortholog | 1-to-1 | GR03G15270 | 1 | ||
Anchor point | N/A | GR05G00430 GR03G15270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G15270 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G052160 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD00G051000 MD00G106770 MD00G311840 ... | 7 | |
Tree-based ortholog | 1-to-many | MD00G051000 MD00G311840 MD11G003990 | 3 | ||
Anchor point | N/A | MD03G003880 MD11G003990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G003990 MD00G311840 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME08301G00010 ME09000G00520 | 2 | |
Tree-based ortholog | 1-to-1 | ME05456G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05456G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G011940 MT5G075410 | 2 | |
Tree-based ortholog | 1-to-many | MT5G075410 MT3G467380 | 2 | ||
Anchor point | N/A | MT5G075410 MT4G028130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G028130 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS07G37610 OS07G48200 | 2 | |
Tree-based ortholog | 1-to-1 | OS07G48200 | 1 | ||
Anchor point | N/A | OS07G48200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G48200 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00031G01410 PP00042G00500 | 2 | |
Tree-based ortholog | 1-to-many | PP00042G00500 PP00031G01410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00042G00500 PP00031G01410 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G03530 PT11G04360 | 2 | |
Tree-based ortholog | 1-to-many | PT19G13030 PT13G15750 | 2 | ||
Anchor point | N/A | PT19G13030 PT13G15750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT19G13030 PT13G15750 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G03440 PPE_006G29970 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_006G03270 | 1 | ||
Anchor point | N/A | PPE_006G29970 PPE_006G03270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G03270 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29915G00050 RC29917G00380 RC29976G00120 | 3 | |
Tree-based ortholog | 1-to-1 | RC29976G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29976G00120 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G079020 SL06G082520 SL10G075030 | 3 | |
Tree-based ortholog | 1-to-1 | SL06G082520 | 1 | ||
Anchor point | N/A | SL06G082520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G075030 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G021990 ST06G033320 ST10G018470 | 3 | |
Tree-based ortholog | 1-to-1 | ST06G033320 | 1 | ||
Anchor point | N/A | ST10G018470 ST06G033320 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G018470 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G13000 TP7G29810 | 2 | |
Tree-based ortholog | 1-to-1 | TP4G13000 | 1 | ||
Anchor point | N/A | TP4G13000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G13000 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G15700 TC0006G19260 TC0009G35660 | 3 | |
Tree-based ortholog | 1-to-1 | TC0009G35660 | 1 | ||
Anchor point | N/A | TC0009G35660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G35660 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV06G00380 VV08G05830 | 2 | |
Tree-based ortholog | 1-to-1 | VV06G00380 | 1 | ||
Anchor point | N/A | VV06G00380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G00380 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G40960 ZM07G24350 ZM07G30140 | 3 | |
Tree-based ortholog | 1-to-many | ZM02G40960 ZM07G30140 | 2 | ||
Anchor point | N/A | ZM02G40960 ZM07G30140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G40960 ZM07G30140 | 2 |