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Integrative Orthology Viewer:
AT2G30390
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G30390 AT5G26030 | 2 |  |
| Tree-based ortholog | AT2G30390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G30390 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00036G01700 ATR_00060G00020 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00060G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00060G00020 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G15010 AL6G26270 | 2 | |
| Tree-based ortholog | 1-to-1 | AL4G15010 | 1 | ||
| Anchor point | N/A | AL4G15010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G15010 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV2G17950 BV3G01890 BV9G15840 | 3 | |
| Tree-based ortholog | 1-to-1 | BV9G15840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G15840 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR06G26900 BR09G42140 | 2 | |
| Tree-based ortholog | 1-to-1 | BR09G42140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G42140 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_004G11220 CRU_006G23090 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_004G11220 | 1 | ||
| Anchor point | N/A | CRU_004G11220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G11220 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00128G00610 CP00138G00180 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00138G00180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00128G00610 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR07G06580 | 1 | |
| Tree-based ortholog | 1-to-1 | CR07G06580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G06580 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G16540 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G18990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G16540 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00005G01770 CS00074G00480 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00074G00480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00074G00480 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00014G01100 CM00039G00430 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00039G00430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00039G00430 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G05110 EG0008G40840 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0008G40840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G40840 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G27580 FV2G32590 | 2 | |
| Tree-based ortholog | 1-to-1 | FV0G27580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G27580 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G05320 GM04G38291 GM05G33160 ... | 6 | |
| Tree-based ortholog | 1-to-many | GM05G33160 GM08G00760 GM06G16750 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G33160 GM08G00760 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G06640 GR10G10220 GR12G04530 | 3 | |
| Tree-based ortholog | 1-to-many | GR12G04530 GR03G06640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G04530 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G019820 LJ1G024270 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ1G019820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G019820 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G110740 MD00G333310 MD00G407800 ... | 5 | |
| Tree-based ortholog | 1-to-many | MD12G024930 MD00G333310 MD04G019470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G024930 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME07961G00020 ME09423G00010 | 2 | |
| Tree-based ortholog | 1-to-many | ME09423G00010 ME06574G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09423G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G097290 MT3G104260 MT4G019850 ... | 4 | |
| Tree-based ortholog | 1-to-many | MT3G097290 MT8G095320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G095320 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS05G29760 OS09G12560 | 2 | |
| Tree-based ortholog | 1-to-1 | OS05G29760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G29760 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL11G02720 | 1 | |
| Tree-based ortholog | 1-to-1 | OL11G02720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G02720 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00038G01550 PP00364G00050 PP00371G00120 | 3 | |
| Tree-based ortholog | 1-to-many | PP00038G01550 PP00371G00120 PP00364G00050 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00364G00050 PP00038G01550 PP00371G00120 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT00G17010 PT04G13840 PT06G23210 | 3 | |
| Tree-based ortholog | 1-to-many | PT04G13840 PT00G17010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G13840 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G41970 PPE_006G36010 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_006G36010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G36010 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29794G00440 RC30225G00520 | 2 | |
| Tree-based ortholog | 1-to-1 | RC30225G00520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30225G00520 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G018650 SL08G065480 SL10G084140 | 3 | |
| Tree-based ortholog | 1-to-1 | SL05G018650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G018650 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST05G017640 ST08G015430 | 2 | |
| Tree-based ortholog | 1-to-1 | ST05G017640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G017640 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP2G21690 TP4G08120 | 2 | |
| Tree-based ortholog | 1-to-1 | TP4G08120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G08120 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G04890 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G23340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G23340 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G07930 VV07G07920 | 2 | |
| Tree-based ortholog | 1-to-1 | VV07G07920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G07920 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G29000 ZM05G17020 ZM05G30970 | 3 | |
| Tree-based ortholog | 1-to-1 | ZM05G30970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G30970 | 1 |