Integrative Orthology Viewer: AT2G23630 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G75790 AT2G23630 AT4G12420 ... | 9 | |
Tree-based ortholog | AT2G23630 | 1 | ||
Anchor point | AT5G66920 AT4G37160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G23630 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00085G00060 ATR_00163G00210 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00169G00310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00169G00310 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G24700 AL4G03390 AL6G35680 ... | 9 | |
Tree-based ortholog | 1-to-1 | AL4G03390 | 1 | ||
Anchor point | many-to-many | AL4G03390 AL7G03760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G03390 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G06060 BV6G09280 BV8G12980 | 3 | |
Tree-based ortholog | 1-to-many | BV6G09290 BV6G09280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G09270 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G00500 BR00G00510 BR01G01810 ... | 17 | |
Tree-based ortholog | 1-to-1 | BR04G13380 | 1 | ||
Anchor point | many-to-many | BR04G13380 BR01G01810 BR03G55590 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G13380 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G20430 CRU_002G21350 CRU_004G02770 ... | 10 | |
Tree-based ortholog | 1-to-1 | CRU_004G02770 | 1 | ||
Anchor point | many-to-many | CRU_007G03100 CRU_008G26740 CRU_004G02770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G02770 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00003G03140 CP00020G01370 CP00029G01200 ... | 4 | |
Tree-based ortholog | 1-to-1 | CP00006G03930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G03930 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G03610 CL01G04430 CL02G24490 ... | 5 | |
Tree-based ortholog | 1-to-1 | CL02G13140 | 1 | ||
Anchor point | many-to-1 | CL01G16890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G13140 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00031G00840 CS00075G00230 CS00271G00090 | 3 | |
Tree-based ortholog | 1-to-1 | CS00006G02520 | 1 | ||
Anchor point | many-to-1 | CS00006G02510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00006G02520 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G03180 CM00005G05280 CM00006G09240 ... | 7 | |
Tree-based ortholog | 1-to-1 | CM00045G01750 | 1 | ||
Anchor point | many-to-1 | CM00007G05640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00045G01750 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G04150 EG0008G06190 EG0011G01390 | 3 | |
Tree-based ortholog | 1-to-1 | EG0009G07650 | 1 | ||
Anchor point | many-to-1 | EG0008G16480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G07650 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G13300 FV3G35640 FV5G00380 ... | 4 | |
Tree-based ortholog | 1-to-1 | FV5G36950 | 1 | ||
Anchor point | many-to-1 | FV5G36940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G36950 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G13670 GM05G04270 GM05G17404 ... | 8 | |
Tree-based ortholog | 1-to-many | GM05G17404 GM17G21530 GM05G17418 | 3 | ||
Anchor point | many-to-many | GM11G06290 GM01G38980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM17G21530 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G04830 GR01G10210 GR04G01600 ... | 9 | |
Tree-based ortholog | 1-to-many | GR08G07300 GR07G20970 | 2 | ||
Anchor point | many-to-1 | GR07G20970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G07300 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G047810 LJ3G049570 LJ5G002820 ... | 5 | |
Tree-based ortholog | 1-to-many | LJ4G014040 LJ6G002320 LJ6G001860 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G022180 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G084990 MD00G191610 MD00G315290 ... | 9 | |
Tree-based ortholog | 1-to-many | MD00G315290 MD00G084990 MD00G501000 | 3 | ||
Anchor point | many-to-1 | MD15G020580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G501000 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01127G00550 ME06158G00100 ME06582G00890 ... | 8 | |
Tree-based ortholog | 1-to-1 | ME12587G00070 | 1 | ||
Anchor point | many-to-1 | ME03235G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12587G00070 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G008580 MT3G083410 MT4G101650 ... | 4 | |
Tree-based ortholog | 1-to-1 | MT8G479380 | 1 | ||
Anchor point | many-to-1 | MT5G018270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G479380 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G01030 OS01G60080 OS04G47400 ... | 8 | |
Tree-based ortholog | 1-to-1 | OS07G02810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G02810 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00136G00600 PP00217G00360 | 2 | |
Tree-based ortholog | 1-to-1 | PP00217G00360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00217G00360 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G12030 PT03G11270 PT03G22420 ... | 6 | |
Tree-based ortholog | 1-to-1 | PT07G03820 | 1 | ||
Anchor point | many-to-1 | PT07G03820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT07G03820 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G19870 PPE_002G26640 PPE_005G08250 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_007G16220 | 1 | ||
Anchor point | many-to-1 | PPE_007G16210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G16220 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28200G00050 RC30147G01660 RC30178G00170 | 3 | |
Tree-based ortholog | 1-to-1 | RC29676G00370 | 1 | ||
Anchor point | many-to-1 | RC29676G00350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29676G00370 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G063150 SL03G083900 SL04G081520 ... | 6 | |
Tree-based ortholog | 1-to-many | SL02G090360 SL02G065170 | 2 | ||
Anchor point | many-to-many | SL02G065170 SL02G090360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G090360 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G019780 ST04G034900 ST05G028900 ... | 6 | |
Tree-based ortholog | 1-to-many | ST02G032620 ST02G011890 | 2 | ||
Anchor point | many-to-many | ST02G032620 ST02G011890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G032620 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G19400 TP2G18800 TP2G18810 ... | 8 | |
Tree-based ortholog | 1-to-1 | TP7G34630 | 1 | ||
Anchor point | many-to-many | TP7G34630 TP2G29740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G34630 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G20460 TC0003G15870 TC0003G25390 ... | 4 | |
Tree-based ortholog | 1-to-1 | TC0001G04740 | 1 | ||
Anchor point | many-to-1 | TC0001G04740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G04740 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G24610 VV02G00070 VV16G04050 | 3 | |
Tree-based ortholog | 1-to-1 | VV00G11630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G11630 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G48720 ZM03G28690 ZM05G12540 ... | 9 | |
Tree-based ortholog | 1-to-many | ZM07G00900 ZM01G48720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G22740 | 1 |