Integrative Orthology Viewer: AT2G05070 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G05070 AT2G05100 AT3G27690 | 3 | |
Tree-based ortholog | AT2G05100 AT2G05070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G05070 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00088G01200 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00088G01200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00088G01200 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G30860 AL5G06790 AL5G06810 | 3 | |
Tree-based ortholog | many-to-1 | AL3G30860 | 1 | ||
Anchor point | N/A | AL3G30860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G30860 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G06340 | 1 | |
Tree-based ortholog | many-to-1 | BV0G06340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G06340 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G38710 BR06G32670 BR09G02500 | 3 | |
Tree-based ortholog | many-to-many | BR09G02500 BR06G32670 BR02G32370 | 3 | ||
Anchor point | N/A | BR03G38710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G38710 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G25580 CRU_005G05720 CRU_005G05730 | 3 | |
Tree-based ortholog | many-to-1 | CRU_003G25580 | 1 | ||
Anchor point | N/A | CRU_003G25580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G25580 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00211G00070 | 1 | |
Tree-based ortholog | many-to-1 | CP00211G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00211G00070 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-many | CR16G10680 CR08G02460 CR08G02800 ... | 25 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G12390 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G02760 | 1 | |
Tree-based ortholog | many-to-1 | CL02G02760 | 1 | ||
Anchor point | N/A | CL02G02760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G02760 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00077G00240 | 1 | |
Tree-based ortholog | many-to-1 | CS00077G00240 | 1 | ||
Anchor point | N/A | CS00077G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00077G00240 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00066G00830 | 1 | |
Tree-based ortholog | many-to-1 | CM00066G00830 | 1 | ||
Anchor point | N/A | CM00066G00830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00066G00830 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G08370 | 1 | |
Tree-based ortholog | many-to-1 | EG0001G08370 | 1 | ||
Anchor point | N/A | EG0001G08370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G08370 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G03880 | 1 | |
Tree-based ortholog | many-to-1 | FV3G03920 | 1 | ||
Anchor point | N/A | FV3G03870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV6G34990 FV3G21500 | 2 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G47560 GM14G01130 | 2 | |
Tree-based ortholog | many-to-many | GM02G47560 GM14G01130 | 2 | ||
Anchor point | N/A | GM02G47560 GM14G01130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G47560 GM14G01130 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G19200 GR01G19230 GR01G22090 | 3 | |
Tree-based ortholog | many-to-many | GR01G19200 GR01G22090 GR01G19230 | 3 | ||
Anchor point | N/A | GR01G22090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR01G22090 GR01G19230 GR01G19200 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G049530 | 1 | |
Tree-based ortholog | many-to-1 | LJ2G049530 | 1 | ||
Anchor point | N/A | LJ2G049530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G049530 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD09G009240 | 1 | |
Tree-based ortholog | many-to-1 | MD09G009240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G009240 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME07991G00320 | 1 | |
Tree-based ortholog | many-to-1 | ME07991G00320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07991G00320 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT5G097280 | 1 | |
Tree-based ortholog | many-to-1 | MT5G097280 | 1 | ||
Anchor point | N/A | MT5G097280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G097280 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G39610 | 1 | |
Tree-based ortholog | many-to-1 | OS03G39610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G39610 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-many | OL20G01170 OL05G01790 OL17G01290 ... | 14 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G01170 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G00050 PP00001G02860 PP00001G02890 ... | 18 | |
Tree-based ortholog | many-to-many | PP00051G01560 PP00001G02860 PP00051G01570 ... | 18 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00001G00050 PP00177G00060 PP00463G00060 ... | 18 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G22140 PT14G16510 | 2 | |
Tree-based ortholog | many-to-many | PT02G22140 PT14G16510 | 2 | ||
Anchor point | N/A | PT14G16510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G22140 PT14G16510 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_003G18180 | 1 | |
Tree-based ortholog | many-to-1 | PPE_003G18180 | 1 | ||
Anchor point | N/A | PPE_003G18180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G18180 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29597G00030 | 1 | |
Tree-based ortholog | many-to-1 | RC29597G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29597G00030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G047850 SL12G006140 | 2 | |
Tree-based ortholog | many-to-many | SL07G047850 SL12G006140 | 2 | ||
Anchor point | N/A | SL07G047850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G006140 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST07G017980 ST12G011480 | 2 | |
Tree-based ortholog | many-to-many | ST07G017980 ST12G011480 | 2 | ||
Anchor point | N/A | ST07G017980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G011480 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G16810 TP3G23600 | 2 | |
Tree-based ortholog | many-to-1 | TP2G16810 | 1 | ||
Anchor point | N/A | TP3G23600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G23600 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G18610 | 1 | |
Tree-based ortholog | many-to-1 | TC0001G18610 | 1 | ||
Anchor point | N/A | TC0001G18610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G18610 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-1 | VV12G09430 | 1 | |
Anchor point | N/A | VV12G09430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G03690 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G45740 ZM01G45770 | 2 | |
Tree-based ortholog | many-to-many | ZM01G45740 ZM01G45770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G45740 ZM01G45770 | 2 |