Integrative Orthology Viewer: AT2G04630 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G04630 AT5G51940 | 2 | |
Tree-based ortholog | AT2G04630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G04630 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00069G00750 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00069G00750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00069G00750 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G30340 AL8G16200 | 2 | |
Tree-based ortholog | 1-to-many | AL3G30340 AL8G16200 | 2 | ||
Anchor point | N/A | AL3G30340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G30340 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G66630 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G66630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G66630 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G09420 BR09G02630 | 2 | |
Tree-based ortholog | 1-to-1 | BR04G09420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G09420 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G25200 CRU_008G11820 | 2 | |
Tree-based ortholog | 1-to-many | CRU_008G11820 CRU_003G25200 | 2 | ||
Anchor point | N/A | CRU_003G25200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G11820 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00370G00110 | 1 | |
Tree-based ortholog | 1-to-1 | CP00370G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00370G00110 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G00480 | 1 | |
Tree-based ortholog | 1-to-1 | CR01G00480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G00480 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G09010 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G09010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G17940 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00062G00430 | 1 | |
Tree-based ortholog | 1-to-1 | CS00062G00430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00062G00430 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G09970 CM01596G04260 | 2 | |
Tree-based ortholog | 1-to-many | CM00006G09970 CM01596G04260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G04260 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G03690 | 1 | |
Tree-based ortholog | 1-to-1 | EG0008G03690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G03690 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G22460 | 1 | |
Tree-based ortholog | 1-to-1 | FV2G22460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G22460 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G38350 GM20G29520 | 2 | |
Tree-based ortholog | 1-to-many | GM10G38350 GM20G29520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G29520 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G01060 | 1 | |
Tree-based ortholog | 1-to-many | GR04G12130 GR07G01060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G01060 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G027140 | 1 | |
Tree-based ortholog | 1-to-1 | LJ2G027140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G027140 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD12G001100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G017680 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME11425G00380 | 1 | |
Tree-based ortholog | 1-to-many | ME00341G01150 ME11425G00380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11425G00380 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT00G20910 MT7G092450 | 2 | |
Tree-based ortholog | 1-to-1 | MT7G092450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT00G20910 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G38960 OS07G27930 | 2 | |
Tree-based ortholog | 1-to-many | OS08G32990 OS07G27930 OS03G38960 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G38960 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G05210 | 1 | |
Tree-based ortholog | 1-to-1 | OL02G05210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G05210 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00197G00070 | 1 | |
Tree-based ortholog | 1-to-1 | PP00197G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00197G00070 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT15G13880 | 1 | |
Tree-based ortholog | 1-to-1 | PT12G13690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT15G13880 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_007G01900 PPE_009G01120 | 2 | |
Tree-based ortholog | 1-to-many | PPE_009G01120 PPE_007G01900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_009G01120 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30147G00570 | 1 | |
Tree-based ortholog | 1-to-1 | RC30147G00570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G00570 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G010500 | 1 | |
Tree-based ortholog | 1-to-1 | SL09G010500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G010500 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G009470 | 1 | |
Tree-based ortholog | 1-to-1 | ST09G009470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G009470 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G17150 TP7G01990 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G01990 | 1 | ||
Anchor point | N/A | TP7G01990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G01990 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G17280 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G17280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G17280 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV12G03590 | 1 | |
Tree-based ortholog | 1-to-1 | VV12G03590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G03590 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G45470 ZM05G08250 | 2 | |
Tree-based ortholog | 1-to-many | ZM05G08250 ZM01G45470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G08250 ZM01G45470 | 2 |