Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT2G04430
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT2G04430 | 1 |  |
| Tree-based ortholog | AT2G04430 | 1 | ||
| Anchor point | AT4G12720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT2G04430 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00111G00760 ATR_00056G01570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00111G00760 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G30070 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G30070 | 1 | ||
| Anchor point | 1-to-1 | AL3G30070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G30070 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G02660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G02660 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR01G20060 BR08G07670 BR03G43070 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G43070 BR08G07670 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G25050 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G25050 | 1 | ||
| Anchor point | 1-to-many | CRU_007G29240 CRU_003G25050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G25050 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00136G00330 CP00012G01460 CP00027G02370 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G01460 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR08G02860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G02860 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL02G02910 CL01G21430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G02910 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00193G00030 CS00007G04120 | 2 | |
| Anchor point | 1-to-1 | CS00193G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00193G00030 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00066G00680 CM00007G10450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00066G00680 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0008G07330 EG0008G07340 EG0008G07350 ... | 15 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0005G28970 EG0007G20640 | 2 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV6G32770 FV2G49680 FV3G02920 ... | 4 | |
| Anchor point | 1-to-1 | FV6G32760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G32770 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM20G06680 GM14G00730 GM17G00965 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM14G00730 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR01G22250 GR07G16570 GR02G10040 ... | 6 | |
| Anchor point | 1-to-many | GR07G16570 GR01G22250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR10G24870 GR10G19040 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G002080 LJ2G050080 | 2 | |
| Anchor point | 1-to-1 | LJ2G050080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G050080 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD09G009590 MD00G126770 MD00G335700 ... | 11 | |
| Anchor point | 1-to-many | MD09G009590 MD17G010230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G010230 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME11174G00020 ME11388G00060 ME11388G00040 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11388G00060 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT3G082770 MT8G091995 MT3G460790 ... | 5 | |
| Anchor point | 1-to-1 | MT3G082770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G082770 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS06G42790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G42790 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL14G01040 OL14G01710 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL14G01710 OL14G01040 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00038G00880 PP00014G01500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00014G01500 PP00038G00880 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT03G10610 PT01G12770 PT05G07750 ... | 7 | |
| Anchor point | 1-to-1 | PT14G16840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G12770 PT05G07750 PT03G10610 | 3 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_003G17880 PPE_004G25050 PPE_004G00390 ... | 4 | |
| Anchor point | 1-to-1 | PPE_003G17880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G17880 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC28663G00030 RC29629G00230 RC29966G00120 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28663G00030 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL12G015700 SL10G005950 SL05G054230 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G005950 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST12G013410 ST10G005640 ST05G027180 ... | 8 | |
| Anchor point | 1-to-1 | ST07G017330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G005640 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP3G23240 | 1 | |
| Anchor point | 1-to-1 | TP3G23240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G14420 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0001G19070 TC0007G01280 TC0006G23250 ... | 4 | |
| Anchor point | 1-to-1 | TC0001G19070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G23260 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV12G09770 VV12G09750 VV12G09760 ... | 5 | |
| Anchor point | 1-to-1 | VV12G09750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV12G09750 VV12G09760 VV12G09770 | 3 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM09G14850 ZM06G13070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G13070 ZM09G14850 | 2 |