Integrative Orthology Viewer: AT2G01340 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT2G01340 | 1 | |
Tree-based ortholog | AT2G01340 | 1 | ||
Anchor point | AT1G71015 AT1G66480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT2G01340 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00002G00140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G00140 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G00280 | 1 | |
Tree-based ortholog | 1-to-1 | AL5G00280 | 1 | ||
Anchor point | many-to-many | AL5G00280 AL2G19710 AL2G13590 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G00280 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G21650 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G21650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G21650 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR02G31450 BR06G35660 BR09G21950 | 3 | |
Tree-based ortholog | 1-to-many | BR09G21950 BR02G31450 | 2 | ||
Anchor point | many-to-many | BR02G31450 BR09G21950 BR06G35660 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G31450 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G00300 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_005G00300 | 1 | ||
Anchor point | many-to-many | CRU_002G16810 CRU_002G11730 CRU_005G00300 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G00300 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00065G01230 | 1 | |
Tree-based ortholog | 1-to-1 | CP00065G01230 | 1 | ||
Anchor point | many-to-1 | CP00065G01230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00065G01230 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL07G07720 | 1 | |
Tree-based ortholog | 1-to-1 | CL07G07720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G07720 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00034G00680 | 1 | |
Tree-based ortholog | 1-to-1 | CS00034G00680 | 1 | ||
Anchor point | many-to-many | CS00042G00170 CS00034G00680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00034G00680 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00033G00740 | 1 | |
Tree-based ortholog | 1-to-1 | CM00033G00740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00033G00740 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G16680 | 1 | |
Tree-based ortholog | 1-to-many | EG0002G23690 EG0007G16680 | 2 | ||
Anchor point | many-to-many | EG0002G23690 EG0006G23440 EG0007G16680 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G16680 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G06500 | 1 | |
Tree-based ortholog | 1-to-1 | FV0G06500 | 1 | ||
Anchor point | many-to-1 | FV0G06500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G06500 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM07G23260 GM07G34010 GM20G01670 | 3 | |
Tree-based ortholog | 1-to-many | GM20G01670 GM07G34010 GM09G21060 ... | 4 | ||
Anchor point | many-to-many | GM07G23260 GM20G01670 GM11G33960 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G34010 GM20G01670 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G18010 GR05G16250 | 2 | |
Tree-based ortholog | 1-to-many | GR05G16250 GR02G18010 GR08G16650 | 3 | ||
Anchor point | many-to-many | GR05G16250 GR02G18010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G16250 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G002540 MD13G001780 MD16G000350 | 3 | |
Tree-based ortholog | 1-to-many | MD13G001780 MD00G002540 MD16G000350 | 3 | ||
Anchor point | many-to-many | MD13G001780 MD16G000350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G002540 MD13G001780 MD16G000350 | 3 | ||
Manihot esculenta | Orthologous gene family | 1-to-many | ME00318G00280 ME04251G00160 | 2 | |
Tree-based ortholog | 1-to-many | ME04251G00160 ME00318G00280 | 2 | ||
Anchor point | many-to-many | ME04043G00320 ME00318G00280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04251G00160 ME00318G00280 | 2 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT1G030740 MT4G085100 | 2 | |
Tree-based ortholog | 1-to-many | MT4G085100 MT1G030740 | 2 | ||
Anchor point | many-to-1 | MT1G030740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G085100 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G14780 | 1 | |
Tree-based ortholog | 1-to-many | OS02G49960 OS06G14780 OS09G23780 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G14780 | 1 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G12870 PT10G11380 | 2 | |
Tree-based ortholog | 1-to-many | PT08G12870 PT10G11380 | 2 | ||
Anchor point | many-to-many | PT17G12880 PT08G12870 PT04G08820 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G12870 PT10G11380 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G33290 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G33290 | 1 | ||
Anchor point | many-to-1 | PPE_001G33290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G33290 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29816G00030 | 1 | |
Tree-based ortholog | 1-to-1 | RC29816G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29816G00030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-many | SL05G008210 SL05G008220 | 2 | |
Tree-based ortholog | 1-to-many | SL05G008210 SL05G008220 SL00G080750 | 3 | ||
Anchor point | many-to-many | SL02G091360 SL05G008210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G008210 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-many | ST05G009530 ST05G009540 | 2 | |
Tree-based ortholog | 1-to-many | ST05G009540 ST05G009530 ST05G009520 | 3 | ||
Anchor point | many-to-many | ST02G029910 ST05G009520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G009540 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G12790 | 1 | |
Tree-based ortholog | 1-to-1 | TP2G12790 | 1 | ||
Anchor point | many-to-many | TP2G12790 TP5G26180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G12790 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G27990 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G27990 | 1 | ||
Anchor point | many-to-1 | TC0002G27990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G27990 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV01G06710 | 1 | |
Tree-based ortholog | 1-to-1 | VV01G06710 | 1 | ||
Anchor point | many-to-many | VV17G06930 VV01G06710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G06710 | 1 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM09G07220 | 1 | |
Tree-based ortholog | 1-to-many | ZM04G24030 ZM05G39370 ZM09G07220 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G07220 | 1 |