Integrative Orthology Viewer: AT1G75840 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G75840 | 1 | |
Tree-based ortholog | AT1G75840 | 1 | ||
Anchor point | AT3G51300 AT1G20090 AT4G35020 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G75840 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00152G00020 | 1 | |
Anchor point | many-to-1 | ATR_00152G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00152G00020 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G24770 | 1 | |
Tree-based ortholog | 1-to-1 | AL2G24770 | 1 | ||
Anchor point | many-to-many | AL7G04800 AL5G20930 AL7G05940 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G24770 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-many | BV9G02250 BV6G17000 BV0G28370 | 3 | |
Anchor point | many-to-many | BV9G02250 BV0G28370 BV6G17000 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G28370 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR02G23460 | 1 | |
Tree-based ortholog | 1-to-1 | BR02G23460 | 1 | ||
Anchor point | many-to-many | BR03G55030 BR10G16880 BR01G02510 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G23460 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G21460 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_002G21460 | 1 | ||
Anchor point | many-to-many | CRU_007G04970 CRU_001G18800 CRU_003G30730 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G21460 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-many | CP00037G01350 CP00006G02810 CP00026G03050 | 3 | |
Anchor point | many-to-many | CP00006G02810 CP00026G03050 CP00037G01350 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G03050 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G05770 | 1 | |
Citrullus lanatus | Tree-based ortholog | 1-to-many | CL02G12150 CL10G01580 CL08G13940 | 3 | |
Anchor point | many-to-many | CL02G12150 CL08G13940 CL10G01580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G13940 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-many | CS00023G00670 CS00017G01500 CS00002G05770 | 3 | |
Anchor point | many-to-many | CS00023G00670 CS00017G01500 CS00002G05770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00023G00670 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-many | CM00045G01000 CM00021G00610 CM00014G07250 | 3 | |
Anchor point | many-to-many | CM00021G00610 CM00045G01000 CM00014G07250 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G07250 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0009G11510 EG0007G13130 EG0009G19610 ... | 4 | |
Anchor point | many-to-many | EG0007G13130 EG0009G19610 EG0009G11510 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G11510 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G07360 | 1 | |
Anchor point | many-to-many | FV2G07360 FV2G38250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G07360 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM11G11510 GM12G03660 GM11G08380 ... | 9 | |
Anchor point | many-to-many | GM04G02530 GM06G02580 GM11G08380 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM04G02530 | 1 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR05G11250 GR07G19230 GR02G19750 ... | 4 | |
Anchor point | many-to-many | GR10G00260 GR02G19750 GR09G26960 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G19750 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G042580 LJ2G029090 | 2 | |
Anchor point | many-to-many | LJ2G029090 LJ1G042580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G042580 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD00G390660 MD15G017900 MD02G011000 ... | 5 | |
Anchor point | many-to-many | MD02G011000 MD15G017900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G390660 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME06512G01370 ME07520G02850 ME01888G00010 ... | 5 | |
Anchor point | many-to-many | ME11821G00110 ME06512G01370 ME07520G02850 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01481G00010 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT4G073250 MT5G022600 MT8G075240 | 3 | |
Anchor point | many-to-many | MT8G075240 MT5G022600 MT4G073250 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G073250 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G58730 OS02G02840 | 2 | |
Anchor point | many-to-1 | OS02G58730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G58730 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL06G02920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G02920 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00051G00550 PP00126G00680 PP00257G00470 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00257G00470 PP00051G00550 PP00126G00680 ... | 4 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT04G17490 PT09G13460 PT05G11070 ... | 5 | |
Anchor point | many-to-many | PT05G24200 PT07G06150 PT05G11070 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G17490 | 1 | ||
Prunus persica | Tree-based ortholog | 1-to-many | PPE_008G18240 PPE_001G37130 | 2 | |
Anchor point | many-to-many | PPE_008G18240 PPE_007G19230 PPE_001G37130 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G18240 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-many | RC29602G00010 RC28962G00290 RC30170G05730 | 3 | |
Anchor point | many-to-many | RC30170G05730 RC28962G00290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29602G00010 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL01G111560 SL02G062020 SL02G083580 | 3 | |
Anchor point | many-to-many | SL03G033420 SL02G083580 SL01G111560 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G062020 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST01G048970 ST10G017350 ST02G009800 ... | 5 | |
Anchor point | many-to-many | ST01G048970 ST02G026890 ST03G009070 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST03G009070 ST02G009800 | 2 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G30980 | 1 | |
Tree-based ortholog | 1-to-1 | TP5G30980 | 1 | ||
Anchor point | many-to-many | TP3G31210 TP7G32780 TP7G33730 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G30980 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-many | TC0001G01380 TC0002G05820 | 2 | |
Anchor point | many-to-many | TC0002G05820 TC0001G01380 TC0008G04570 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G05820 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV18G10940 VV03G04760 | 2 | |
Anchor point | many-to-many | VV18G10940 VV04G00320 VV03G04760 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G04760 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM05G44890 ZM04G40170 | 2 | |
Anchor point | many-to-1 | ZM05G17680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G40170 | 1 |