Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G74960
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G74960 | 1 |  |
| Tree-based ortholog | AT1G74960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G74960 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00007G03510 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00007G03510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G03510 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL1G20210 AL2G23840 | 2 | |
| Tree-based ortholog | 1-to-1 | AL2G23840 | 1 | ||
| Anchor point | N/A | AL2G23840 AL1G20210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G23840 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G14250 | 1 | |
| Tree-based ortholog | 1-to-1 | BV8G14250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G14250 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G22920 BR06G13810 BR07G20180 ... | 4 | |
| Tree-based ortholog | 1-to-many | BR08G03410 BR07G20180 BR07G30390 ... | 4 | ||
| Anchor point | N/A | BR07G20180 BR02G22920 BR07G30390 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G20180 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_001G18060 CRU_002G20540 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_002G20540 | 1 | ||
| Anchor point | N/A | CRU_001G18060 CRU_002G20540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G20540 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00261G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00166G00270 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR07G05630 | 1 | |
| Tree-based ortholog | 1-to-1 | CR07G05630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G05630 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL03G14510 | 1 | |
| Tree-based ortholog | 1-to-1 | CL03G14510 | 1 | ||
| Anchor point | N/A | CL03G14510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G14510 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-many | CS00009G02480 CS00013G02040 CS00366G00030 ... | 5 | |
| Tree-based ortholog | 1-to-many | CS00366G00040 CS00366G00060 CS00366G00020 ... | 6 | ||
| Anchor point | N/A | CS00013G02040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00013G02040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00025G03450 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00025G03450 | 1 | ||
| Anchor point | N/A | CM00025G03450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G03450 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0003G06330 EG0003G25730 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0003G06330 | 1 | ||
| Anchor point | N/A | EG0003G06330 EG0003G25730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G06330 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-many | FV0G16260 FV1G10830 | 2 | |
| Tree-based ortholog | 1-to-1 | FV1G10830 | 1 | ||
| Anchor point | N/A | FV0G16260 FV1G10830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G10830 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM13G17290 GM15G20030 GM17G05200 | 3 | |
| Tree-based ortholog | 1-to-many | GM17G05200 GM13G17290 GM15G20030 | 3 | ||
| Anchor point | N/A | GM17G05200 GM15G20030 GM13G17290 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G05200 GM13G17290 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR04G28530 GR06G09010 GR10G09140 ... | 4 | |
| Tree-based ortholog | 1-to-1 | GR06G09010 | 1 | ||
| Anchor point | N/A | GR04G28530 GR13G22260 GR10G09140 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G22260 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-many | LJ4G036950 LJ4G047020 LJ6G015460 | 3 | |
| Tree-based ortholog | 1-to-many | LJ6G015460 LJ4G036950 | 2 | ||
| Anchor point | N/A | LJ4G036950 LJ6G015460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G036950 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD09G017130 MD15G015910 MD15G021730 | 3 | |
| Tree-based ortholog | 1-to-many | MD15G021730 MD08G022520 MD15G015910 | 3 | ||
| Anchor point | N/A | MD15G015910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G015910 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME09570G00020 ME10114G00220 | 2 | |
| Tree-based ortholog | 1-to-1 | ME02538G00280 | 1 | ||
| Anchor point | N/A | ME09570G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10114G00220 ME09570G00020 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT2G043530 MT4G124880 MT8G099695 | 3 | |
| Tree-based ortholog | 1-to-many | MT4G124880 MT2G043530 | 2 | ||
| Anchor point | N/A | MT4G124880 MT2G043530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G043530 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G28420 OS07G42420 | 2 | |
| Anchor point | N/A | OS07G42420 OS03G28420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G42420 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-many | OL14G01340 OL14G02040 | 2 | |
| Tree-based ortholog | 1-to-many | OL14G02040 OL14G01340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL14G02040 OL14G01340 | 2 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00052G00140 PP00056G00980 PP00201G00430 | 3 | |
| Tree-based ortholog | 1-to-many | PP00108G00540 PP00146G00240 PP00060G01190 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00108G00540 PP00107G00010 PP00159G00230 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G13800 PT18G06290 | 2 | |
| Tree-based ortholog | 1-to-1 | PT03G06980 | 1 | ||
| Anchor point | N/A | PT18G06290 PT03G06980 PT06G13800 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G13800 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-many | PPE_003G02350 PPE_007G21370 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_007G21370 | 1 | ||
| Anchor point | N/A | PPE_007G21370 PPE_003G02350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G21370 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29693G00710 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29739G01460 | 1 | ||
| Anchor point | N/A | RC29739G01460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29739G01460 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL03G122120 SL12G009260 | 2 | |
| Tree-based ortholog | 1-to-1 | SL12G009260 | 1 | ||
| Anchor point | N/A | SL03G122100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G122120 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST03G034820 ST07G016290 ST12G008720 | 3 | |
| Tree-based ortholog | 1-to-1 | ST07G016290 | 1 | ||
| Anchor point | N/A | ST12G008720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G016290 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP1G17170 TP5G30100 | 2 | |
| Tree-based ortholog | 1-to-1 | TP5G30100 | 1 | ||
| Anchor point | N/A | TP1G17170 TP5G30100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G30100 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-many | TC0006G12470 TC0006G12500 TC0009G06840 | 3 | |
| Tree-based ortholog | 1-to-many | TC0006G12500 TC0006G12470 | 2 | ||
| Anchor point | N/A | TC0009G06840 TC0006G12470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G06840 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV11G02140 | 1 | |
| Tree-based ortholog | 1-to-1 | VV09G02020 | 1 | ||
| Anchor point | N/A | VV09G02020 VV11G02140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV09G02020 VV11G02140 | 2 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM02G38950 ZM07G27200 ZM09G19390 | 3 | |
| Tree-based ortholog | 1-to-many | ZM09G19390 ZM02G38950 ZM07G27200 | 3 | ||
| Anchor point | N/A | ZM09G02230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G19390 | 1 |