Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G72680
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G72680 | 1 |  |
| Tree-based ortholog | AT1G72680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G72680 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00018G00790 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00018G00790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00018G00790 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G21480 | 1 | |
| Tree-based ortholog | 1-to-many | AL2G21480 AL3G37840 | 2 | ||
| Anchor point | N/A | AL2G21480 AL7G02600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G21480 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G12110 | 1 | |
| Tree-based ortholog | 1-to-1 | BV1G12110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G12110 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR07G28770 | 1 | |
| Tree-based ortholog | 1-to-1 | BR07G28770 | 1 | ||
| Anchor point | N/A | BR07G28770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G28770 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G18430 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_002G18430 | 1 | ||
| Anchor point | N/A | CRU_002G18430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G18430 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00037G01130 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00037G01130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00037G01130 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR03G12720 CR03G12670 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR03G12720 CR03G12670 | 2 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G01090 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G01090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL02G01340 CL02G01360 | 2 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00009G03320 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00009G03320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G03320 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00005G07870 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00005G07870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G07870 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0004G03670 EG0004G03690 EG0005G09300 ... | 12 | |
| Tree-based ortholog | 1-to-many | EG0004G03680 EG0004G03670 EG0004G03690 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0005G09410 EG0005G09400 EG0005G09300 ... | 8 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G41330 | 1 | |
| Tree-based ortholog | 1-to-many | FV0G51170 FV0G51150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G41330 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM13G32830 GM15G06460 | 2 | |
| Tree-based ortholog | 1-to-many | GM13G32830 GM15G06460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G06460 GM13G32830 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR08G26210 | 1 | |
| Tree-based ortholog | 1-to-1 | GR08G26210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G26210 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ6G027760 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ6G027760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G027760 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G212030 MD17G010440 | 2 | |
| Tree-based ortholog | 1-to-many | MD17G010500 MD17G010480 MD17G010440 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G212030 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME00772G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | ME00772G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00772G00020 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G009810 | 1 | |
| Tree-based ortholog | 1-to-many | MT2G009810 MT2G009820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G009810 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS10G11810 OS11G40690 | 2 | |
| Tree-based ortholog | 1-to-many | OS11G40690 OS10G11810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS10G11810 OS11G40690 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL17G00610 OL16G01240 OL02G00710 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL16G01240 OL02G00710 | 2 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00084G01030 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00084G01030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00084G01030 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G08530 PT03G19670 PT06G02430 ... | 6 | |
| Tree-based ortholog | 1-to-many | PT03G19670 PT00G08560 PT16G02330 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G14810 PT11G14820 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_003G17580 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_001G55010 PPE_004G09510 PPE_006G31430 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G14450 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30068G01170 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30068G01170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30068G01170 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL12G055820 | 1 | |
| Tree-based ortholog | 1-to-1 | SL12G055820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G055820 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST12G024500 | 1 | |
| Tree-based ortholog | 1-to-1 | ST12G024500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G024500 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G27740 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G27740 | 1 | ||
| Anchor point | N/A | TP5G27740 TP7G35610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G27740 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G21350 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G21350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G21350 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-many | VV00G01780 VV02G06110 | 2 | |
| Tree-based ortholog | 1-to-many | VV00G01730 VV02G06120 VV02G06110 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G06110 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM02G03950 ZM09G02350 | 2 | |
| Tree-based ortholog | 1-to-many | ZM02G03950 ZM09G02350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G02350 ZM02G03950 | 2 |