Integrative Orthology Viewer: AT1G69240 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G26360 AT1G69240 | 2 | |
Tree-based ortholog | AT1G69240 | 1 | ||
Anchor point | AT1G26360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G69240 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00154G00590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00154G00590 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL2G17490 | 1 | |
Anchor point | 1-to-1 | AL2G17490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G17490 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV2G01530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G01530 | 1 | ||
Brassica rapa | Tree-based ortholog | 1-to-1 | BR02G19700 | 1 | |
Anchor point | 1-to-many | BR02G19700 BR08G23190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G19700 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G23670 CRU_002G14870 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_002G14870 | 1 | ||
Anchor point | 1-to-many | CRU_002G14870 CRU_001G23670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G14870 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00014G01960 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00471G00020 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-many | CL11G14070 CL07G17430 | 2 | |
Anchor point | 1-to-many | CL11G14070 CL07G17430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G17430 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00019G01960 | 1 | |
Anchor point | 1-to-1 | CS00019G01960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G02670 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-many | CM00051G00800 CM00013G00030 | 2 | |
Anchor point | 1-to-1 | CM00051G00800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00051G00800 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0007G18690 | 1 | |
Anchor point | 1-to-1 | EG0007G18690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G12170 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G03940 | 1 | |
Anchor point | 1-to-many | FV6G42290 FV0G03940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G03940 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM08G27210 GM18G50420 | 2 | |
Anchor point | 1-to-many | GM18G50420 GM08G27210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G50420 GM08G27210 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR07G07040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G07040 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G028890 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G028890 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD13G004000 | 1 | |
Anchor point | 1-to-1 | MD13G004000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G004000 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME04489G00120 | 1 | |
Anchor point | 1-to-many | ME04489G00120 ME04043G01990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04489G00120 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G015220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G015220 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS07G41230 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G41230 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00035G01170 PP00112G00960 PP00156G00120 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00156G00120 PP00112G00960 PP00035G01170 | 3 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT08G09690 | 1 | |
Anchor point | 1-to-many | PT04G11650 PT08G09690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G09690 PT04G11650 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G30020 | 1 | |
Anchor point | 1-to-many | PPE_003G23150 PPE_001G30020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G30020 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC30174G04890 | 1 | |
Anchor point | 1-to-1 | RC30174G04890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27623G00070 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL05G012180 | 1 | |
Anchor point | 1-to-1 | SL05G012180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G012180 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST05G005850 | 1 | |
Anchor point | 1-to-many | ST02G033880 ST05G005850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G033880 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP5G24290 | 1 | |
Anchor point | 1-to-many | TP1G22330 TP5G24290 TP2G18050 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G24290 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G32840 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G32840 | 1 | ||
Anchor point | 1-to-many | TC0002G32840 TC0004G10230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G32840 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV01G10550 | 1 | |
Anchor point | 1-to-many | VV01G10550 VV14G13110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G13110 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM07G26610 ZM02G38690 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G38690 ZM07G26610 | 2 |