Integrative Orthology Viewer: AT1G67560 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G17420 AT1G55020 AT1G67560 ... | 6 | |
Tree-based ortholog | AT3G45140 AT1G55020 AT1G72520 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G67560 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00022G02400 ATR_00022G02410 ATR_00022G02450 ... | 7 | |
Tree-based ortholog | many-to-many | ATR_00103G00260 ATR_00022G02420 ATR_00022G02890 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00049G02180 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G18330 AL1G52190 AL2G15530 ... | 6 | |
Tree-based ortholog | many-to-many | AL5G13180 AL2G21330 AL1G18330 ... | 6 | ||
Anchor point | N/A | AL2G15530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G15530 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G76990 BV4G03930 BV4G03940 ... | 13 | |
Tree-based ortholog | many-to-many | BV4G12340 BV0G76990 BV4G03980 ... | 13 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G12160 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G28840 BR01G36350 BR02G16950 ... | 13 | |
Tree-based ortholog | many-to-many | BR07G22990 BR07G23210 BR05G21170 ... | 14 | ||
Anchor point | N/A | BR02G18540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G23210 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G16390 CRU_002G07710 CRU_002G13070 ... | 7 | |
Tree-based ortholog | many-to-many | CRU_002G07710 CRU_003G21560 CRU_002G13070 ... | 7 | ||
Anchor point | N/A | CRU_002G13070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G13070 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00008G00560 CP00017G01070 CP00025G01270 ... | 11 | |
Tree-based ortholog | many-to-many | CP00032G00300 CP00027G00270 CP00008G00560 ... | 17 | ||
Anchor point | N/A | CP00043G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00043G00240 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G02920 | 1 | |
Tree-based ortholog | many-to-1 | CR12G02920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G02920 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G15860 CL02G15870 CL02G15890 ... | 17 | |
Tree-based ortholog | many-to-many | CL02G15900 CL02G15910 CL02G15930 ... | 24 | ||
Anchor point | N/A | CL11G08040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G08040 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G00910 CS00011G01030 CS00032G00300 ... | 14 | |
Tree-based ortholog | many-to-many | CS00032G00300 CS00033G01020 CS00101G00510 ... | 15 | ||
Anchor point | N/A | CS00003G00910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G00910 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00003G03650 CM00003G03680 CM00003G03700 ... | 20 | |
Tree-based ortholog | many-to-many | CM00022G04640 CM35700G00010 CM00525G00010 ... | 27 | ||
Anchor point | N/A | CM00016G01980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G01980 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G06130 EG0008G28610 EG0008G36440 ... | 19 | |
Tree-based ortholog | many-to-many | EG0217G00040 EG0010G07210 EG0010G07180 ... | 19 | ||
Anchor point | N/A | EG0008G37730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G37730 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G12340 FV0G15980 FV0G42500 ... | 15 | |
Tree-based ortholog | many-to-many | FV3G15720 FV4G06040 FV3G42810 ... | 16 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G12340 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM00G00240 GM02G26160 GM03G22610 ... | 41 | |
Tree-based ortholog | many-to-many | GM00G00240 GM20G37813 GM07G00873 ... | 53 | ||
Anchor point | N/A | GM08G10840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM08G10840 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G05950 GR04G05970 GR04G05990 ... | 17 | |
Tree-based ortholog | many-to-many | GR04G05990 GR04G06010 GR10G22040 ... | 20 | ||
Anchor point | N/A | GR05G17020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G17020 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G072260 LJ3G003300 LJ3G003460 ... | 11 | |
Tree-based ortholog | many-to-many | LJ6G012200 LJ1G072260 LJ3G003300 ... | 17 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G036410 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G012230 MD00G038220 MD00G046400 ... | 31 | |
Tree-based ortholog | many-to-many | MD12G022180 MD12G022170 MD00G138690 ... | 46 | ||
Anchor point | N/A | MD13G008660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G374650 MD13G008660 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G02230 ME03572G00030 ME03614G02890 ... | 17 | |
Tree-based ortholog | many-to-many | ME11106G00190 ME03614G04040 ME12525G00060 ... | 19 | ||
Anchor point | N/A | ME04175G01020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04175G01020 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G083020 MT1G104650 MT2G099560 ... | 31 | |
Tree-based ortholog | many-to-many | MT5G023990 MT7G012030 MT3G107560 ... | 36 | ||
Anchor point | N/A | MT8G080230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G080230 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G10120 OS03G08220 OS03G49260 ... | 14 | |
Tree-based ortholog | many-to-many | OS12G37320 OS02G19790 OS04G37430 ... | 15 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G08220 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL07G01910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G01910 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00021G01990 PP00036G01900 PP00070G00750 ... | 14 | |
Tree-based ortholog | many-to-many | PP00312G00300 PP00209G00410 PP00434G00160 ... | 16 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00070G00750 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G01530 PT01G01540 PT01G01550 ... | 20 | |
Tree-based ortholog | many-to-many | PT10G05710 PT13G02200 PT10G08950 ... | 20 | ||
Anchor point | N/A | PT10G05710 PT08G17800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G05710 PT08G17800 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G01130 PPE_001G24310 PPE_002G07760 ... | 14 | |
Tree-based ortholog | many-to-many | PPE_002G07780 PPE_008G20530 PPE_006G32940 ... | 15 | ||
Anchor point | N/A | PPE_001G24310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G24310 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29468G00010 RC29680G00490 RC29726G00030 ... | 12 | |
Tree-based ortholog | many-to-many | RC29851G00630 RC30169G01570 RC29929G02000 ... | 12 | ||
Anchor point | N/A | RC29929G02000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G02000 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G006540 SL01G006560 SL01G009680 ... | 17 | |
Tree-based ortholog | many-to-many | SL09G055890 SL01G099190 SL09G075860 ... | 18 | ||
Anchor point | N/A | SL05G014790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G014790 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G007030 ST01G007050 ST01G036960 ... | 20 | |
Tree-based ortholog | many-to-many | ST08G010710 ST11G016320 ST08G010720 ... | 29 | ||
Anchor point | N/A | ST05G015810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST05G015810 ST11G007820 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G00040 TP1G15560 TP3G20160 ... | 6 | |
Tree-based ortholog | many-to-many | TP5G27600 TP5G22580 TP1G00040 ... | 6 | ||
Anchor point | N/A | TP5G22580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G22580 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G20410 TC0002G27510 TC0004G23170 ... | 17 | |
Tree-based ortholog | many-to-many | TC0005G19830 TC0005G30000 TC0006G12120 ... | 20 | ||
Anchor point | N/A | TC0002G27510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G27510 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G12470 VV00G24530 VV01G03950 ... | 12 | |
Tree-based ortholog | many-to-many | VV06G06550 VV13G07300 VV06G06640 ... | 14 | ||
Anchor point | N/A | VV01G03950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G03950 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G05460 ZM01G32540 ZM01G49720 ... | 12 | |
Tree-based ortholog | many-to-many | ZM01G32540 ZM05G23630 ZM04G38240 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G05460 | 1 |