Integrative Orthology Viewer: AT1G67070 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G67070 AT3G02570 | 2 | |
Tree-based ortholog | AT1G67070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G67070 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00079G00580 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00079G00580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00079G00580 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G14880 AL3G01760 | 2 | |
Tree-based ortholog | 1-to-1 | AL2G14880 | 1 | ||
Anchor point | N/A | AL2G14880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G14880 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G07290 | 1 | |
Tree-based ortholog | 1-to-1 | BV2G07290 | 1 | ||
Anchor point | N/A | BV2G07290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G07290 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G35270 BR02G18160 BR05G35560 | 3 | |
Tree-based ortholog | 1-to-1 | BR02G18160 | 1 | ||
Anchor point | N/A | BR02G18160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G18160 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G12560 CRU_003G01590 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_002G12560 | 1 | ||
Anchor point | N/A | CRU_002G12560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G12560 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00282G00040 | 1 | |
Tree-based ortholog | 1-to-1 | CP00282G00040 | 1 | ||
Anchor point | N/A | CP00282G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00282G00040 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G11780 | 1 | |
Tree-based ortholog | 1-to-1 | CR02G11780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G11780 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G05070 CL05G12920 | 2 | |
Tree-based ortholog | 1-to-1 | CL05G12920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G12920 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00071G00690 | 1 | |
Tree-based ortholog | 1-to-1 | CS00071G00690 | 1 | ||
Anchor point | N/A | CS00071G00690 CS00008G00640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00071G00690 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00042G00320 | 1 | |
Tree-based ortholog | 1-to-1 | CM00042G00320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00042G00320 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G20470 | 1 | |
Tree-based ortholog | 1-to-1 | EG0006G20470 | 1 | ||
Anchor point | N/A | EG0006G20470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G20470 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G30760 | 1 | |
Tree-based ortholog | 1-to-many | FV4G04820 FV5G30760 | 2 | ||
Anchor point | N/A | FV0G01340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G30760 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G48120 GM13G07660 GM18G53370 | 3 | |
Tree-based ortholog | 1-to-many | GM13G07660 GM19G06740 GM18G53370 ... | 4 | ||
Anchor point | N/A | GM08G48120 GM13G07660 GM18G53370 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G48120 GM18G53370 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G05530 | 1 | |
Tree-based ortholog | 1-to-many | GR07G18180 GR08G05530 | 2 | ||
Anchor point | N/A | GR07G18180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G05530 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD09G023820 MD17G018350 | 2 | |
Tree-based ortholog | 1-to-many | MD17G018350 MD09G023820 MD00G356770 | 3 | ||
Anchor point | N/A | MD13G002530 MD16G001480 MD09G023820 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD09G023820 MD17G018350 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04043G00820 ME06871G00630 | 2 | |
Tree-based ortholog | 1-to-many | ME06871G00630 ME04043G00820 | 2 | ||
Anchor point | N/A | ME04043G00820 ME06871G00630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04043G00820 ME06871G00630 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G007320 | 1 | |
Tree-based ortholog | 1-to-1 | MT7G007320 | 1 | ||
Anchor point | N/A | MT7G007320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G007320 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G03710 OS09G22090 OS11G38810 | 3 | |
Tree-based ortholog | 1-to-many | OS09G22090 OS01G03710 OS11G38810 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G03710 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G00280 | 1 | |
Tree-based ortholog | 1-to-1 | OL02G00280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G00280 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00015G02380 PP00195G00260 | 2 | |
Tree-based ortholog | 1-to-many | PP00195G00260 PP00015G02380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00015G02380 PP00195G00260 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT17G11550 | 1 | |
Tree-based ortholog | 1-to-many | PT17G11550 PT04G09910 | 2 | ||
Anchor point | N/A | PT17G11550 PT04G09910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G11550 PT04G09910 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G32300 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_003G11450 | 1 | ||
Anchor point | N/A | PPE_001G32300 PPE_003G11450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G11450 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30066G00120 | 1 | |
Tree-based ortholog | 1-to-1 | RC29980G00010 | 1 | ||
Anchor point | N/A | RC30066G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30066G00120 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G063220 SL02G086090 SL06G060100 | 3 | |
Tree-based ortholog | 1-to-many | SL06G060100 SL02G086090 SL02G063220 | 3 | ||
Anchor point | N/A | SL02G086090 SL02G063220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G063220 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G010930 ST02G029240 ST06G017870 | 3 | |
Tree-based ortholog | 1-to-many | ST06G017870 ST02G029240 ST02G010930 | 3 | ||
Anchor point | N/A | ST02G029240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G010930 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G01610 TP5G22000 | 2 | |
Tree-based ortholog | 1-to-1 | TP5G22000 | 1 | ||
Anchor point | N/A | TP5G22000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G22000 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G13940 | 1 | |
Tree-based ortholog | 1-to-1 | TC0004G13940 | 1 | ||
Anchor point | N/A | TC0004G13940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G13940 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV14G07990 | 1 | |
Tree-based ortholog | 1-to-1 | VV14G07990 | 1 | ||
Anchor point | N/A | VV01G07550 VV14G07990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G07990 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G06290 ZM04G02790 | 2 | |
Tree-based ortholog | 1-to-many | ZM06G04830 ZM05G17460 ZM03G06290 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G06290 | 1 |