Integrative Orthology Viewer: AT1G64900 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G64900 AT1G64930 AT1G64940 ... | 7 | |
Tree-based ortholog | AT1G64900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G64900 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G01730 ATR_00040G00470 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00001G01730 ATR_00040G00470 ATR_00062G00270 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00040G00470 ATR_00001G01730 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G08820 AL2G08850 AL3G02840 ... | 4 | |
Tree-based ortholog | 1-to-1 | AL2G08820 | 1 | ||
Anchor point | N/A | AL2G08820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G08820 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G03320 BV3G07150 BV6G04530 ... | 5 | |
Tree-based ortholog | 1-to-many | BV1G03320 BV3G07150 BV6G04530 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV6G06580 BV6G04530 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G27860 BR01G27870 BR02G26290 ... | 4 | |
Tree-based ortholog | 1-to-many | BR01G27860 BR01G27870 BR02G26290 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G26290 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G09230 CRU_002G09270 CRU_002G09330 ... | 4 | |
Tree-based ortholog | 1-to-many | CRU_002G09230 CRU_002G09270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CRU_002G09270 CRU_002G09230 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00043G01370 | 1 | |
Tree-based ortholog | 1-to-1 | CP00043G01370 | 1 | ||
Anchor point | N/A | CP00043G01370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00043G01370 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G00590 CL06G01590 CL09G15360 ... | 5 | |
Tree-based ortholog | 1-to-many | CL01G00590 CL09G15370 CL09G15380 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G15380 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00585G00020 CS00585G00030 CS00585G00040 ... | 5 | |
Tree-based ortholog | 1-to-many | CS02122G00010 CS00585G00010 CS02122G00020 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS02122G00020 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G08410 CM00050G00280 CM00050G00290 ... | 6 | |
Tree-based ortholog | 1-to-many | CM00005G08410 CM00050G00280 CM00050G00320 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00050G00280 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G09660 EG0008G09670 EG0008G09680 ... | 26 | |
Tree-based ortholog | 1-to-many | EG0142G00050 EG0008G09660 EG0142G00040 ... | 29 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0008G09680 EG3394G00010 EG0008G09850 ... | 21 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G40560 FV4G11710 FV5G29180 ... | 6 | |
Tree-based ortholog | 1-to-many | FV7G38360 FV7G38390 FV3G40560 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV7G38320 FV4G11710 FV7G38360 ... | 5 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G34540 GM07G34550 GM07G34560 ... | 8 | |
Tree-based ortholog | 1-to-many | GM18G18120 GM20G02330 GM20G02310 ... | 7 | ||
Anchor point | N/A | GM12G01640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G34560 GM20G02330 GM07G34550 ... | 6 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G05860 GR04G25530 GR07G34770 ... | 7 | |
Tree-based ortholog | 1-to-many | GR13G10340 GR07G34790 GR07G34770 ... | 7 | ||
Anchor point | N/A | GR04G25530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G05860 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G027230 LJ2G027360 LJ3G050610 ... | 4 | |
Tree-based ortholog | 1-to-many | LJ1G027230 LJ4G013610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G013610 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G020410 MD01G020420 MD06G010210 ... | 7 | |
Tree-based ortholog | 1-to-many | MD06G010210 MD06G010220 MD06G010230 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD06G010230 MD06G010210 MD01G020420 ... | 5 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME11297G00680 ME11297G00690 ME11297G00700 ... | 4 | |
Tree-based ortholog | 1-to-many | ME11297G00710 ME11297G00690 ME06484G00140 ... | 7 | ||
Anchor point | N/A | ME03614G01300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11297G00680 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G010250 MT2G010280 MT2G010290 ... | 12 | |
Tree-based ortholog | 1-to-many | MT8G063260 MT8G063280 MT2G010250 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT2G010300 MT2G010250 MT2G010280 ... | 7 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS06G22340 OS08G05610 OS08G05620 ... | 5 | |
Tree-based ortholog | 1-to-many | OS01G24810 OS08G05610 OS08G05620 ... | 16 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS08G05620 OS06G22340 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00314G00250 PP00033G00540 | 2 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G03280 PT00G15460 PT01G33050 ... | 11 | |
Tree-based ortholog | 1-to-many | PT07G08800 PT00G15450 PT00G15460 ... | 15 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G15440 PT07G08800 PT00G15460 ... | 7 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G28340 PPE_002G28360 PPE_002G28370 ... | 4 | |
Tree-based ortholog | 1-to-many | PPE_002G28340 PPE_002G28350 PPE_002G28370 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_002G28370 PPE_002G28360 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29827G00760 RC30148G00720 RC30148G00730 ... | 6 | |
Tree-based ortholog | 1-to-many | RC30148G00720 RC30148G00800 RC30148G00790 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC30148G00780 RC30148G00740 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G096980 SL03G096990 SL04G010320 ... | 4 | |
Tree-based ortholog | 1-to-many | SL03G096980 SL03G096990 SL06G074180 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G096990 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G017540 ST03G017550 ST03G017560 ... | 9 | |
Tree-based ortholog | 1-to-many | ST03G017600 ST03G017640 ST03G017630 ... | 13 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G017650 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G02470 TP5G19200 | 2 | |
Tree-based ortholog | 1-to-1 | TP5G19200 | 1 | ||
Anchor point | N/A | TP5G19200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G19200 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G20930 TC0005G22410 TC0005G22600 ... | 8 | |
Tree-based ortholog | 1-to-many | TC0005G22650 TC0005G22670 TC0005G22640 ... | 8 | ||
Anchor point | N/A | TC0005G22410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0005G22630 TC0005G22620 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV16G04930 | 1 | |
Tree-based ortholog | 1-to-many | VV16G04930 VV16G04910 VV16G04950 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G00490 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G40250 ZM05G12330 ZM08G28340 | 3 | |
Tree-based ortholog | 1-to-many | ZM10G26150 ZM03G40790 ZM08G28340 ... | 19 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G40250 | 1 |