Integrative Orthology Viewer: AT1G63840 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G63840 | 1 | |
Tree-based ortholog | AT1G63840 | 1 | ||
Anchor point | AT5G41400 AT4G11360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G63840 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00001G03860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G03860 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G01250 | 1 | |
Tree-based ortholog | 1-to-1 | AL2G01250 | 1 | ||
Anchor point | many-to-many | AL7G36260 AL6G34080 AL2G01250 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G01250 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-many | BV5G07210 BV5G07200 BV1G06230 | 3 | |
Anchor point | many-to-many | BV5G07200 BV1G06230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G06230 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR09G11410 BR09G12590 | 2 | |
Tree-based ortholog | 1-to-many | BR09G11410 BR09G12590 | 2 | ||
Anchor point | many-to-many | BR08G10000 BR09G12590 BR09G11410 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G12590 BR09G11410 | 2 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G01030 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_002G01030 | 1 | ||
Anchor point | many-to-many | CRU_002G01030 CRU_007G32740 CRU_006G29110 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G01030 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00180G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00011G00400 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL01G02310 | 1 | |
Anchor point | many-to-many | CL05G01670 CL01G02310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G02310 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00009G01240 | 1 | |
Anchor point | many-to-many | CS00009G01240 CS00001G03400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G01240 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00005G06700 | 1 | |
Anchor point | many-to-many | CM00005G06700 CM00006G01760 CM00047G00540 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G06700 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0004G19070 | 1 | |
Anchor point | many-to-many | EG0004G14730 EG0005G05590 EG0004G19070 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G14730 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV5G03280 | 1 | |
Anchor point | many-to-many | FV7G07460 FV5G03280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G03280 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM17G17180 GM11G02470 GM01G43020 ... | 5 | |
Anchor point | many-to-many | GM05G37580 GM11G02470 GM18G47020 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G02470 GM01G43020 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR07G02410 GR07G02420 GR07G02400 ... | 5 | |
Anchor point | many-to-many | GR04G13960 GR07G10170 GR07G02400 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G10170 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G046130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G046130 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD00G153130 MD00G504140 MD00G127780 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G153130 MD00G127780 | 2 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME08159G00060 ME05280G00530 | 2 | |
Anchor point | many-to-many | ME02658G01040 ME05280G00530 ME03581G01530 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08159G00060 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT5G010100 MT8G098770 | 2 | |
Anchor point | many-to-many | MT8G098770 MT5G010100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G098770 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS04G49000 OS02G45710 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS04G49000 OS02G45710 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00185G00660 PP00249G00310 PP00460G00100 ... | 6 | |
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT01G10100 PT03G13090 | 2 | |
Anchor point | many-to-many | PT14G08770 PT02G16190 PT01G10100 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G13090 | 1 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_005G11290 | 1 | |
Anchor point | many-to-many | PPE_002G16950 PPE_005G11290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G11290 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC30190G04200 | 1 | |
Anchor point | many-to-many | RC30174G03170 RC30190G04200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G04200 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL08G008080 SL08G081370 | 2 | |
Anchor point | many-to-1 | SL08G081370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G081370 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST08G009790 ST08G029050 | 2 | |
Anchor point | many-to-many | ST08G029050 ST08G009790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G029050 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G00850 | 1 | |
Tree-based ortholog | 1-to-1 | TP2G00850 | 1 | ||
Anchor point | many-to-many | TP2G00850 TP7G00550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G00850 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0003G27890 | 1 | |
Anchor point | many-to-many | TC0001G35280 TC0003G27890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G35280 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV01G08760 VV01G08720 VV01G08730 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G08220 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM02G06570 ZM10G21850 ZM04G21180 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G06570 | 1 |