Integrative Orthology Viewer: AT1G61560 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G11310 AT1G61560 AT2G39200 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | AT1G61560 | 1 | ||
Tree-based ortholog | AT1G61560 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00044G01050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00034G00450 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00034G00450 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G11550 AL2G04260 AL4G25600 | 3 | |
Anchor point | N/A | AL1G11550 AL2G04260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G04260 | 1 | ||
Tree-based ortholog | 1-to-1 | AL2G04260 | 1 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G13830 | 1 | |
Tree-based ortholog | 1-to-many | BV6G13830 BV1G00850 BV0G32140 ... | 8 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G13020 BR01G26100 BR03G19700 ... | 8 | |
Anchor point | N/A | BR06G07460 BR01G26100 BR09G50250 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G13970 | 1 | ||
Tree-based ortholog | 1-to-many | BR00G13020 BR01G26100 BR09G13970 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G10370 CRU_001G10380 CRU_002G03430 ... | 4 | |
Anchor point | N/A | CRU_002G03430 CRU_001G10370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G03430 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_002G03430 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00435G00050 | 1 | |
Tree-based ortholog | 1-to-1 | CP00053G00570 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G03670 | 1 | |
Tree-based ortholog | 1-to-1 | CR01G03670 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G21160 CL03G02310 CL05G22020 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G21160 | 1 | ||
Tree-based ortholog | 1-to-1 | CL05G22020 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00270G00080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00270G00080 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00270G00080 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00004G03980 CM00082G00860 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00004G03980 | 1 | ||
Tree-based ortholog | 1-to-1 | CM00016G07840 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G09410 EG0002G19980 EG0010G08320 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G08320 | 1 | ||
Tree-based ortholog | 1-to-many | EG0010G09740 EG0007G22250 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G51680 FV6G48440 FV7G24180 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G48440 | 1 | ||
Tree-based ortholog | 1-to-1 | FV7G24180 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G07110 GM10G35640 GM12G29310 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM16G26090 | 1 | ||
Tree-based ortholog | 1-to-many | GM16G26100 GM02G07110 GM10G35640 ... | 5 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G13080 GR09G07860 GR10G20500 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G24070 | 1 | ||
Tree-based ortholog | 1-to-many | GR11G24070 GR12G00410 GR10G20510 ... | 4 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G043970 | 1 | |
Tree-based ortholog | 1-to-many | LJ6G026340 LJ1G043970 LJ1G044050 ... | 6 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G016110 MD00G186970 MD04G007620 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G016110 MD00G186970 | 2 | ||
Tree-based ortholog | 1-to-many | MD00G016110 MD00G186970 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01895G00140 ME02943G01180 ME07520G03600 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00271G00010 | 1 | ||
Tree-based ortholog | 1-to-many | ME00271G00010 ME12004G00540 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G093750 MT3G115940 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G033330 | 1 | ||
Tree-based ortholog | 1-to-1 | MT6G033330 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G03700 OS06G29110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS03G03700 OS06G29110 | 2 | ||
Tree-based ortholog | 1-to-many | OS03G03700 OS06G29110 OS05G09050 ... | 12 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL13G00410 | 1 | |
Tree-based ortholog | 1-to-1 | OL13G00410 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00403G00240 PP00024G00070 PP00099G00630 ... | 5 | |
Tree-based ortholog | 1-to-many | PP00099G00630 PP00024G00070 PP00210G00390 ... | 11 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G04140 PT09G01190 PT10G22050 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G04140 PT10G22050 | 2 | ||
Tree-based ortholog | 1-to-many | PT08G04140 PT10G22050 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G20800 PPE_005G00830 PPE_006G24730 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G09670 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_002G20800 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28802G00010 RC30078G01440 RC30111G00380 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28802G00010 | 1 | ||
Tree-based ortholog | 1-to-1 | RC28802G00010 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL00G007200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G010030 | 1 | ||
Tree-based ortholog | 1-to-many | SL03G095650 SL04G049090 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G007200 ST02G025790 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G010590 | 1 | ||
Tree-based ortholog | 1-to-many | ST03G021200 ST04G016840 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G09960 TP2G03050 | 2 | |
Anchor point | N/A | TP2G03050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G03050 | 1 | ||
Tree-based ortholog | 1-to-1 | TP2G03050 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G00290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G06740 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0010G06740 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV06G05150 VV08G02630 VV18G12580 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G02630 | 1 | ||
Tree-based ortholog | 1-to-many | VV13G03360 VV13G03350 | 2 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM01G02060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G02060 | 1 | ||
Tree-based ortholog | 1-to-many | ZM01G02060 ZM06G09690 ZM05G16400 ... | 13 |