Integrative Orthology Viewer: AT1G60960 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G10970 AT1G60960 | 2 | |
Tree-based ortholog | AT1G60960 | 1 | ||
Anchor point | AT1G10970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G60960 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00036G00140 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00036G00140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00036G00140 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G11130 AL2G04990 | 2 | |
Tree-based ortholog | 1-to-1 | AL2G04990 | 1 | ||
Anchor point | 1-to-many | AL1G11130 AL2G04990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G04990 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G39040 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G39040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G39040 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G25660 BR09G14230 | 2 | |
Tree-based ortholog | 1-to-many | BR01G25660 BR09G14230 | 2 | ||
Anchor point | 1-to-many | BR09G14230 BR09G50490 BR01G25660 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G25660 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G10010 CRU_002G04100 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_002G04100 | 1 | ||
Anchor point | 1-to-many | CRU_001G10010 CRU_002G04100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G04100 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00007G01650 | 1 | |
Tree-based ortholog | 1-to-1 | CP00007G01650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00007G01650 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G13140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR07G10060 CR13G02820 CR07G10050 | 3 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G16620 | 1 | |
Tree-based ortholog | 1-to-1 | CL08G16620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G16620 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00005G02070 | 1 | |
Tree-based ortholog | 1-to-1 | CS00005G02070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00005G02070 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00014G01010 | 1 | |
Tree-based ortholog | 1-to-1 | CM00014G01010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G01010 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0003G05210 | 1 | |
Tree-based ortholog | 1-to-1 | EG0003G05210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G05210 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G32790 | 1 | |
Tree-based ortholog | 1-to-1 | FV2G32790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G32790 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM06G05460 | 1 | |
Tree-based ortholog | 1-to-many | GM17G34660 GM14G10841 GM04G05410 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G05460 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G04480 GR10G10060 | 2 | |
Tree-based ortholog | 1-to-many | GR10G10060 GR09G04480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G04480 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G024380 | 1 | |
Tree-based ortholog | 1-to-many | LJ1G024380 LJ5G004740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G024380 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G109620 MD08G006760 | 2 | |
Tree-based ortholog | 1-to-many | MD08G006760 MD00G109620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G109620 MD08G006760 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME12118G00010 | 1 | |
Tree-based ortholog | 1-to-1 | ME12118G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12118G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT3G104400 | 1 | |
Tree-based ortholog | 1-to-many | MT3G104400 MT1G016120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G104400 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS05G10940 OS06G37010 | 2 | |
Tree-based ortholog | 1-to-many | OS05G10940 OS06G37010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G10940 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00157G00230 | 1 | |
Tree-based ortholog | 1-to-many | PP00144G00250 PP00019G00810 PP00014G02080 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00157G00230 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT18G05330 | 1 | |
Tree-based ortholog | 1-to-1 | PT18G05330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT18G05330 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G41750 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G41750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G41750 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29794G00190 | 1 | |
Tree-based ortholog | 1-to-1 | RC29794G00190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29794G00190 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL08G065190 | 1 | |
Tree-based ortholog | 1-to-1 | SL08G065190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G065190 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST08G014660 | 1 | |
Tree-based ortholog | 1-to-1 | ST08G014660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G014660 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G09690 TP2G03620 | 2 | |
Tree-based ortholog | 1-to-1 | TP2G03620 | 1 | ||
Anchor point | 1-to-many | TP2G03620 TP1G09690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G03620 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G05110 | 1 | |
Tree-based ortholog | 1-to-1 | TC0009G05110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G05110 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV04G08350 | 1 | |
Tree-based ortholog | 1-to-1 | VV04G08350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G09730 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM06G14570 | 1 | |
Tree-based ortholog | 1-to-many | ZM06G20800 ZM06G14570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G14570 | 1 |