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Integrative Orthology Viewer:
AT1G60860
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G10870 AT1G60860 AT5G13300 ... | 4 |  |
| Tree-based ortholog | AT1G60860 | 1 | ||
| Anchor point | AT1G10870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G60860 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00016G01200 ATR_00029G01350 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00029G01350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G01350 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G11030 AL2G05130 AL6G13030 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AL2G05130 | 1 | ||
| Anchor point | 1-to-many | AL1G11030 AL2G05130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G05130 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G23290 BV5G14150 BV6G10550 ... | 4 | |
| Tree-based ortholog | 1-to-1 | BV9G10320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G10320 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G38430 BR03G05320 BR06G07190 ... | 6 | |
| Tree-based ortholog | 1-to-1 | BR09G14380 | 1 | ||
| Anchor point | 1-to-many | BR09G14380 BR06G07190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G14380 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G09920 CRU_002G04230 CRU_006G11160 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CRU_002G04230 | 1 | ||
| Anchor point | 1-to-many | CRU_002G04230 CRU_001G09920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G04230 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00013G01480 CP00038G00810 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00002G00530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00038G00810 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G02870 | 1 | |
| Tree-based ortholog | 1-to-1 | CR03G02870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G02870 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G14130 | 1 | |
| Tree-based ortholog | 1-to-1 | CL07G14130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G14130 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00081G00150 CS00151G00170 CS00187G00160 | 3 | |
| Tree-based ortholog | 1-to-many | CS00187G00160 CS00151G00170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00151G00170 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00031G02860 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00033G00080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00031G02860 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G14760 EG0010G07410 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0010G07410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G07410 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G08990 FV0G13920 FV4G23790 | 3 | |
| Tree-based ortholog | 1-to-1 | FV4G23790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G23790 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G37780 GM05G38550 GM06G17295 ... | 7 | |
| Tree-based ortholog | 1-to-many | GM12G03320 GM11G11130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G03320 GM11G11130 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G02170 GR03G11650 GR05G15200 ... | 6 | |
| Tree-based ortholog | 1-to-many | GR05G15190 GR05G15200 GR08G17100 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G17100 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G039870 LJ4G044760 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ4G044760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G039870 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G134850 MD04G005980 MD13G000530 ... | 6 | |
| Tree-based ortholog | 1-to-many | MD16G008260 MD00G134850 MD13G000530 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD16G008260 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01701G00690 ME09557G00020 | 2 | |
| Tree-based ortholog | 1-to-many | ME00999G00050 ME00999G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09557G00020 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G098680 MT4G074170 MT7G020860 ... | 4 | |
| Tree-based ortholog | 1-to-1 | MT4G074170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G074170 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G42134 OS08G42530 OS09G33600 | 3 | |
| Tree-based ortholog | 1-to-1 | OS02G42134 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G42134 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL13G02700 OL21G00300 | 2 | |
| Tree-based ortholog | 1-to-many | OL21G00300 OL13G02700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL21G00300 OL13G02700 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00036G00060 PP00177G00210 PP00249G00330 | 3 | |
| Tree-based ortholog | 1-to-1 | PP00249G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00036G00060 PP00177G00210 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G06680 PT03G16320 PT15G10550 | 3 | |
| Tree-based ortholog | 1-to-many | PT15G10550 PT03G16320 PT01G06680 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G06680 PT03G16320 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G22470 PPE_001G35280 PPE_005G15020 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_001G35280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G35280 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29801G01830 RC30128G04500 RC30147G03210 | 3 | |
| Tree-based ortholog | 1-to-1 | RC29801G01830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G01830 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G118260 SL04G008660 SL05G023750 ... | 4 | |
| Tree-based ortholog | 1-to-many | SL04G008660 SL12G042180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G008660 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G031700 ST04G008520 ST05G019340 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ST08G011810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G008520 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G09570 TP2G03810 TP2G25160 ... | 4 | |
| Tree-based ortholog | 1-to-1 | TP2G03810 | 1 | ||
| Anchor point | 1-to-many | TP2G03810 TP1G09570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G03810 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0002G18830 TC0002G30980 TC0003G14120 | 3 | |
| Tree-based ortholog | 1-to-1 | TC0002G30980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G30980 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G01110 VV01G02830 VV17G08960 | 3 | |
| Tree-based ortholog | 1-to-1 | VV01G02830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G02830 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G34190 ZM07G18390 | 2 | |
| Tree-based ortholog | 1-to-1 | ZM04G10140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G34190 | 1 |