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Integrative Orthology Viewer:
AT1G59940
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G10470 AT1G59940 | 2 |  |
| Tree-based ortholog | AT1G59940 | 1 | ||
| Anchor point | AT1G10470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G59940 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00063G00250 ATR_00002G00370 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00063G00250 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G10390 AL2G06200 | 2 | |
| Tree-based ortholog | 1-to-1 | AL2G06200 | 1 | ||
| Anchor point | 1-to-many | AL2G06200 AL1G10390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G06200 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G03800 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G03800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G03800 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G14530 BR06G06830 BR09G14940 | 3 | |
| Tree-based ortholog | 1-to-1 | BR09G14940 | 1 | ||
| Anchor point | 1-to-many | BR06G06830 BR09G14940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G14940 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G09470 CRU_002G05060 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_002G05060 | 1 | ||
| Anchor point | 1-to-many | CRU_002G05060 CRU_001G09470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G05060 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00005G03230 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00005G03230 | 1 | ||
| Anchor point | 1-to-1 | CP00005G03230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00005G03230 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G04720 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G25880 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G25880 | 1 | ||
| Anchor point | 1-to-1 | CL05G25880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G17210 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00003G03250 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00003G03250 | 1 | ||
| Anchor point | 1-to-1 | CS00003G03250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G03250 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00016G03510 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00016G03510 | 1 | ||
| Anchor point | 1-to-many | CM00016G03510 CM00030G00500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G03510 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G27910 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G27910 | 1 | ||
| Anchor point | 1-to-many | EG0002G20830 EG0002G27910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G27910 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV4G22540 | 1 | |
| Tree-based ortholog | 1-to-1 | FV4G22540 | 1 | ||
| Anchor point | 1-to-1 | FV4G22540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G22540 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G04421 GM02G03140 GM08G40330 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM02G03140 GM01G04421 GM18G17330 ... | 4 | ||
| Anchor point | 1-to-many | GM06G19870 GM02G03140 GM18G17330 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G03140 GM01G04421 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G12350 | 1 | |
| Tree-based ortholog | 1-to-1 | GR12G12350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G12350 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G022790 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G022790 | 1 | ||
| Anchor point | 1-to-1 | LJ2G022790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G006750 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD16G004710 | 1 | |
| Tree-based ortholog | 1-to-many | MD13G005820 MD16G004710 | 2 | ||
| Anchor point | 1-to-many | MD06G014800 MD16G004710 MD13G005820 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD16G004710 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04209G00430 ME11495G01090 | 2 | |
| Tree-based ortholog | 1-to-many | ME04209G00430 ME11495G01090 | 2 | ||
| Anchor point | 1-to-1 | ME11495G01090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME11495G01090 ME04209G00430 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G049100 MT5G036480 | 2 | |
| Tree-based ortholog | 1-to-many | MT5G036480 MT1G049100 | 2 | ||
| Anchor point | 1-to-1 | MT5G036480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G036480 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS11G04720 OS12G04500 OS01G72330 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G72330 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G03420 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00010G01830 PP00094G00280 PP00062G00090 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00010G01830 PP00172G00200 PP00062G00090 ... | 7 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT08G19300 PT10G03780 | 2 | |
| Tree-based ortholog | 1-to-many | PT10G03780 PT08G19300 | 2 | ||
| Anchor point | 1-to-many | PT08G19300 PT10G03780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G19300 PT10G03780 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G27270 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G27270 | 1 | ||
| Anchor point | 1-to-1 | PPE_001G27270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G27270 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29736G00960 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29736G00960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29736G00960 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G006420 | 1 | |
| Tree-based ortholog | 1-to-1 | SL05G006420 | 1 | ||
| Anchor point | 1-to-1 | SL05G006420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G006420 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST05G012020 | 1 | |
| Tree-based ortholog | 1-to-1 | ST05G012020 | 1 | ||
| Anchor point | 1-to-1 | ST05G012020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G012020 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G09100 TP2G04670 | 2 | |
| Tree-based ortholog | 1-to-1 | TP2G04670 | 1 | ||
| Anchor point | 1-to-many | TP1G09100 TP2G04670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G04670 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G23890 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G23890 | 1 | ||
| Anchor point | 1-to-many | TC0002G23890 TC0003G00250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G23890 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV01G13270 | 1 | |
| Tree-based ortholog | 1-to-1 | VV01G13270 | 1 | ||
| Anchor point | 1-to-1 | VV01G13270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G13270 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM10G00270 ZM08G27710 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G00270 | 1 |