Integrative Orthology Viewer: AT1G58370 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G10050 AT1G58370 AT4G08160 | 3 | |
Tree-based ortholog | AT1G58370 | 1 | ||
Anchor point | AT1G10050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G58370 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00026G01180 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00026G01180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00026G01180 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G09890 AL2G07200 AL6G30290 | 3 | |
Tree-based ortholog | 1-to-1 | AL2G07200 | 1 | ||
Anchor point | 1-to-many | AL2G07200 AL1G09890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G07200 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G29660 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G29660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G29660 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G16040 BR09G15320 | 2 | |
Tree-based ortholog | 1-to-1 | BR09G15320 | 1 | ||
Anchor point | 1-to-1 | BR09G15320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G15320 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G09060 CRU_002G05860 CRU_006G25790 | 3 | |
Tree-based ortholog | 1-to-1 | CRU_002G05860 | 1 | ||
Anchor point | 1-to-many | CRU_001G09060 CRU_002G05860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G05860 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00160G00190 CP00160G00200 | 2 | |
Tree-based ortholog | 1-to-many | CP00160G00200 CP00160G00190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00160G00200 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G18770 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G18770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G18770 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00004G03730 | 1 | |
Tree-based ortholog | 1-to-1 | CS00004G03730 | 1 | ||
Anchor point | 1-to-1 | CS00004G03730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G03730 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00029G02290 CM00108G00080 | 2 | |
Tree-based ortholog | 1-to-many | CM00108G00080 CM00029G02290 | 2 | ||
Anchor point | 1-to-1 | CM00029G02290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00108G00080 CM00029G02290 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G00910 EG0006G00920 EG0006G17980 | 3 | |
Tree-based ortholog | 1-to-many | EG0006G00910 EG0006G00920 EG0006G17980 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0006G00910 EG0006G00920 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G32310 | 1 | |
Tree-based ortholog | 1-to-1 | FV2G32310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G32310 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G05220 GM06G05290 GM14G10456 ... | 4 | |
Tree-based ortholog | 1-to-many | GM14G10456 GM17G35060 GM06G05290 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G35060 GM14G10456 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G22350 GR09G22360 GR10G02910 | 3 | |
Tree-based ortholog | 1-to-many | GR10G02910 GR09G22350 GR09G22360 | 3 | ||
Anchor point | 1-to-many | GR10G02910 GR09G22350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G02910 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ5G036320 LJ5G036310 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ5G036310 LJ5G036320 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G365460 MD08G009510 | 2 | |
Tree-based ortholog | 1-to-many | MD15G001310 MD00G365460 MD08G009510 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G365460 MD08G009510 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03299G00240 ME04260G00210 ME04260G00220 ... | 4 | |
Tree-based ortholog | 1-to-many | ME04260G00230 ME04260G00220 ME03299G00240 ... | 4 | ||
Anchor point | 1-to-1 | ME03299G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03299G00240 ME04260G00220 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G017020 MT3G103610 | 2 | |
Tree-based ortholog | 1-to-many | MT1G017020 MT3G103610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G017020 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G04290 OS01G04300 OS05G23350 ... | 4 | |
Tree-based ortholog | 1-to-1 | OS03G47010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G27320 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00299G00280 PP00121G00480 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00299G00280 PP00121G00480 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT02G11310 | 1 | |
Tree-based ortholog | 1-to-1 | PT02G11310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G11310 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G42180 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G42180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G42180 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30170G00320 | 1 | |
Tree-based ortholog | 1-to-many | RC30170G00330 RC30170G00340 RC30170G00320 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G00320 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G077190 SL12G088210 | 2 | |
Tree-based ortholog | 1-to-many | SL04G077190 SL12G088210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G077190 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G030080 ST12G026290 | 2 | |
Tree-based ortholog | 1-to-many | ST04G030080 ST04G030100 ST12G026290 | 3 | ||
Anchor point | 1-to-1 | ST12G026290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G030080 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G05190 TP6G10020 | 2 | |
Tree-based ortholog | 1-to-1 | TP2G05190 | 1 | ||
Anchor point | 1-to-many | TP1G08700 TP2G05190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G05190 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G07840 | 1 | |
Tree-based ortholog | 1-to-many | TC0008G07840 TC0008G07830 | 2 | ||
Anchor point | 1-to-1 | TC0008G07830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G07840 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G05360 | 1 | |
Tree-based ortholog | 1-to-1 | VV18G05360 | 1 | ||
Anchor point | 1-to-1 | VV18G05360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G05360 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM05G06560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G06560 | 1 |