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Integrative Orthology Viewer:
AT1G56600
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G09350 AT1G56600 AT1G60450 ... | 5 |  |
| Tree-based ortholog | AT1G56600 | 1 | ||
| Anchor point | AT1G09350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G56600 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G01960 ATR_00096G00680 | 2 | |
| Tree-based ortholog | 1-to-many | ATR_00096G00680 ATR_00003G01960 | 2 | ||
| Anchor point | 1-to-1 | ATR_00003G01960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G01960 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G09020 AL1G53090 AL2G05670 | 3 | |
| Tree-based ortholog | 1-to-1 | AL1G53090 | 1 | ||
| Anchor point | 1-to-many | AL1G53090 AL1G09020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G53090 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV4G09090 BV4G09110 BV5G15680 | 3 | |
| Tree-based ortholog | 1-to-1 | BV5G15680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G09110 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G00660 BR09G14700 BR09G15860 ... | 4 | |
| Tree-based ortholog | 1-to-many | BR09G51230 BR09G15860 | 2 | ||
| Anchor point | 1-to-1 | BR09G15860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G15860 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G08280 CRU_002G04580 CRU_002G06920 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_002G06920 | 1 | ||
| Anchor point | 1-to-many | CRU_002G06920 CRU_001G08280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G06920 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00048G01920 CP00069G00600 CP00146G00700 | 3 | |
| Tree-based ortholog | 1-to-1 | CP00048G01920 | 1 | ||
| Anchor point | 1-to-1 | CP00048G01920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00048G01920 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G01170 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G13320 CL05G26300 CL06G04090 ... | 4 | |
| Tree-based ortholog | 1-to-1 | CL01G13320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G09890 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G06170 CS00016G01900 CS00016G01910 | 3 | |
| Tree-based ortholog | 1-to-1 | CS00004G04600 | 1 | ||
| Anchor point | 1-to-1 | CS00004G04600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G06170 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00018G01510 CM00047G01210 CM00080G00010 | 3 | |
| Tree-based ortholog | 1-to-1 | CM00080G00010 | 1 | ||
| Anchor point | 1-to-1 | CM00047G01210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00047G01210 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G14410 EG0002G14420 EG0002G33630 ... | 17 | |
| Tree-based ortholog | 1-to-1 | EG0008G26780 | 1 | ||
| Anchor point | 1-to-1 | EG0008G26780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0017G00050 EG0017G00120 EG0017G00010 ... | 13 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G08480 FV1G21650 FV3G38220 ... | 5 | |
| Tree-based ortholog | 1-to-many | FV6G03020 FV6G03010 | 2 | ||
| Anchor point | 1-to-1 | FV6G03010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G21650 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G38080 GM03G38910 GM10G28610 ... | 6 | |
| Tree-based ortholog | 1-to-many | GM03G38910 GM19G41550 GM20G22700 ... | 4 | ||
| Anchor point | 1-to-many | GM19G41550 GM20G22700 GM03G38910 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G38080 GM19G40680 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G23540 GR07G12090 GR13G20850 | 3 | |
| Tree-based ortholog | 1-to-many | GR13G13090 GR13G13080 GR13G20850 ... | 4 | ||
| Anchor point | 1-to-many | GR13G13080 GR13G20850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G23540 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G068880 LJ1G070250 LJ5G026190 | 3 | |
| Tree-based ortholog | 1-to-many | LJ5G026190 LJ1G068880 | 2 | ||
| Anchor point | 1-to-1 | LJ1G068880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G026190 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G103980 MD00G393240 MD04G015490 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD00G031380 MD11G005640 MD00G393240 ... | 4 | ||
| Anchor point | 1-to-1 | MD04G015490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G103980 MD17G021920 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00708G00140 ME01551G04720 ME02264G01010 ... | 6 | |
| Tree-based ortholog | 1-to-many | ME10305G00570 ME10305G00580 ME02264G01010 | 3 | ||
| Anchor point | 1-to-many | ME02264G01010 ME10305G00570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00080G00180 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G084660 MT1G084670 MT7G109920 ... | 4 | |
| Tree-based ortholog | 1-to-many | MT1G084670 MT1G084660 MT4G132185 ... | 4 | ||
| Anchor point | 1-to-many | MT1G084660 MT7G111850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G109920 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G20120 OS07G48830 | 2 | |
| Tree-based ortholog | 1-to-many | OS03G20120 OS07G48830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G20120 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00351G00160 PP00223G00150 PP00021G01830 | 3 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G19160 PT05G00680 PT08G10100 ... | 9 | |
| Tree-based ortholog | 1-to-many | PT05G00680 PT00G17660 PT13G00580 ... | 4 | ||
| Anchor point | 1-to-1 | PT13G00580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G00590 PT05G00680 PT13G00580 | 3 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G10580 PPE_001G26240 PPE_006G31500 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_006G31500 | 1 | ||
| Anchor point | 1-to-1 | PPE_006G31490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_010G00500 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29631G00230 RC29889G01190 RC30076G01680 | 3 | |
| Tree-based ortholog | 1-to-many | RC30128G03340 RC30128G03350 | 2 | ||
| Anchor point | 1-to-1 | RC30128G03340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC30128G03350 RC30128G03340 | 2 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G079170 SL02G062590 SL02G084980 | 3 | |
| Tree-based ortholog | 1-to-many | SL01G100830 SL02G062590 | 2 | ||
| Anchor point | 1-to-many | SL01G100830 SL01G079170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G084980 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G023410 ST02G010200 ST02G028120 | 3 | |
| Tree-based ortholog | 1-to-many | ST01G038630 ST02G010200 | 2 | ||
| Anchor point | 1-to-many | ST01G023410 ST01G038630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G028120 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G07960 TP2G04260 TP2G06100 ... | 4 | |
| Tree-based ortholog | 1-to-many | TP1G07960 TP2G06100 | 2 | ||
| Anchor point | 1-to-many | TP2G06100 TP1G07960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G06100 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0002G25230 TC0004G30750 TC0005G32350 | 3 | |
| Tree-based ortholog | 1-to-1 | TC0005G32350 | 1 | ||
| Anchor point | 1-to-1 | TC0005G32350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G32350 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV14G09900 | 1 | |
| Tree-based ortholog | 1-to-many | VV05G02020 VV05G11150 VV14G09960 ... | 6 | ||
| Anchor point | 1-to-1 | VV14G09990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G09900 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G13760 | 1 | |
| Tree-based ortholog | 1-to-many | ZM01G13760 ZM07G30500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G13760 | 1 |