Integrative Orthology Viewer: AT1G55260 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G55260 | 1 | |
Tree-based ortholog | AT1G55260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G55260 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00236G00030 ATR_00236G00060 ATR_00008G00710 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G02980 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL1G49860 | 1 | |
Anchor point | N/A | AL1G49860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G49860 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G11690 | 1 | |
Tree-based ortholog | 1-to-1 | BV4G11690 | 1 | ||
Anchor point | N/A | BV4G11690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11690 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR08G00660 | 1 | |
Tree-based ortholog | 1-to-many | BR06G00490 BR08G00660 | 2 | ||
Anchor point | N/A | BR06G00490 BR08G00660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G00660 | 1 | ||
Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_001G41670 | 1 | |
Anchor point | N/A | CRU_001G41670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G41670 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00023G01380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01500G00030 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-many | CL02G23920 CL03G13780 | 2 | |
Tree-based ortholog | 1-to-many | CL02G23920 CL03G13780 | 2 | ||
Anchor point | N/A | CL02G23920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G23920 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00043G00640 | 1 | |
Tree-based ortholog | 1-to-1 | CS00043G00640 | 1 | ||
Anchor point | N/A | CS00043G00640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00043G00640 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-many | CM00022G05020 CM00025G04440 | 2 | |
Tree-based ortholog | 1-to-many | CM00022G05020 CM00025G04440 | 2 | ||
Anchor point | N/A | CM00022G05020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G05020 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0002G30270 EG0002G30280 | 2 | |
Tree-based ortholog | 1-to-many | EG0002G30270 EG0002G30280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G30270 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G36550 | 1 | |
Tree-based ortholog | 1-to-1 | FV3G36550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G36550 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM05G28720 GM08G11840 GM11G36460 | 3 | |
Tree-based ortholog | 1-to-many | GM08G11840 GM05G28720 GM11G36460 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM11G36460 | 1 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR04G09400 GR10G12710 | 2 | |
Tree-based ortholog | 1-to-many | GR04G01740 GR09G00090 GR10G12710 ... | 4 | ||
Anchor point | N/A | GR04G01740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G12710 | 1 | ||
Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G040990 | 1 | |
Tree-based ortholog | 1-to-many | LJ4G040990 LJ3G001850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G040990 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD03G001160 MD11G000730 | 2 | |
Tree-based ortholog | 1-to-many | MD03G001160 MD11G000730 | 2 | ||
Anchor point | N/A | MD11G000730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G000730 MD03G001160 | 2 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME00341G00030 | 1 | |
Tree-based ortholog | 1-to-1 | ME00341G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00341G00030 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G085560 | 1 | |
Tree-based ortholog | 1-to-many | MT8G085560 MT3G083760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G085560 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G07100 | 1 | |
Tree-based ortholog | 1-to-many | OS03G07100 OS03G58940 OS07G09970 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G07100 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00172G00220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00309G00030 PP00171G00130 | 2 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G00850 PT03G21700 | 2 | |
Tree-based ortholog | 1-to-many | PT03G21700 PT01G00850 | 2 | ||
Anchor point | N/A | PT03G21700 PT01G00850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G21700 PT01G00850 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G06310 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_006G06310 | 1 | ||
Anchor point | N/A | PPE_006G06310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G06310 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC30133G00080 | 1 | |
Tree-based ortholog | 1-to-1 | RC30133G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30133G00080 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G005990 | 1 | |
Tree-based ortholog | 1-to-1 | SL01G005990 | 1 | ||
Anchor point | N/A | SL01G005990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G005990 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G006370 | 1 | |
Tree-based ortholog | 1-to-1 | ST01G006370 | 1 | ||
Anchor point | N/A | ST01G006370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G027440 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G40920 | 1 | |
Tree-based ortholog | 1-to-1 | TP1G40920 | 1 | ||
Anchor point | N/A | TP1G40920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G40920 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0009G20860 | 1 | |
Tree-based ortholog | 1-to-1 | TC0009G20860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G20860 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-many | VV06G07160 VV06G07190 | 2 | |
Tree-based ortholog | 1-to-many | VV06G07190 VV06G07160 | 2 | ||
Anchor point | N/A | VV06G07190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV06G07160 VV06G07190 | 2 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM01G04780 | 1 | |
Tree-based ortholog | 1-to-many | ZM01G04780 ZM01G56650 ZM07G04170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G04780 | 1 |