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Integrative Orthology Viewer:
AT1G54290
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G54290 | 1 |  |
| Tree-based ortholog | AT1G54290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G54290 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00010G05230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G05230 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G49550 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G49550 | 1 | ||
| Anchor point | N/A | AL1G49550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G49550 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G00720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G70330 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR08G00830 BR08G01850 | 2 | |
| Tree-based ortholog | 1-to-many | BR08G01850 BR08G00830 | 2 | ||
| Anchor point | N/A | BR08G00830 BR08G01850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G17430 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G41470 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G41470 | 1 | ||
| Anchor point | N/A | CRU_001G41470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G41470 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00097G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00097G00540 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G12800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G12800 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL09G10280 CL10G05030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G00320 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00152G00220 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00046G00780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00152G00220 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00019G00660 CM00078G00190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G04390 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0011G06790 EG0006G29120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G06790 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV3G25050 FV6G41280 FV3G23980 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G16210 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM06G42071 GM06G42061 GM12G16390 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G10810 GM06G45930 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR13G16340 GR07G31420 GR09G42640 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR02G08360 GR07G31420 GR13G16340 ... | 4 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ2G047830 LJ6G009170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G015590 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD17G006100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD03G017860 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME03241G00740 ME05206G00220 ME12753G00200 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05206G00220 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT2G083180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G046733 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS05G41900 | 1 | |
| Tree-based ortholog | 1-to-1 | OS01G58220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G41900 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G01920 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00023G00950 PP00310G00040 PP00004G00570 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00004G00570 PP00023G00950 PP00310G00040 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT01G41860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT07G12260 PT07G12270 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_004G20460 PPE_003G22230 PPE_004G19630 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_004G19630 PPE_003G22230 | 2 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC28166G00460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28166G00460 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL03G031810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G031810 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST06G015330 ST12G012690 | 2 | |
| Tree-based ortholog | 1-to-many | ST07G026120 ST03G008320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST06G015330 ST12G012690 | 2 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP7G25100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G25100 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0007G04890 TC0007G04940 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G04940 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV12G12280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G12280 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM03G29690 | 1 | |
| Tree-based ortholog | 1-to-many | ZM07G23330 ZM03G29690 ZM06G27580 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G29690 | 1 |