Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G53690
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G53690 | 1 |  |
| Tree-based ortholog | AT1G53690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G53690 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL7G36700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G36700 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G21480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G21480 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR06G01000 BR08G01180 BR05G16580 | 3 | |
| Anchor point | N/A | BR06G01000 BR08G01180 BR05G16580 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR06G01000 BR08G01180 BR05G16580 | 3 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G40930 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G40930 | 1 | ||
| Anchor point | N/A | CRU_001G40930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G40930 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00025G02080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00025G02080 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR07G06950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G06950 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL01G09120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G09120 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00008G00330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00008G00330 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00008G00970 CM00001G02700 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00001G02700 CM00008G00970 | 2 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV3G25430 FV5G15370 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G15370 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM09G29390 GM16G33820 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G33820 GM09G29390 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR07G00230 GR10G23660 | 2 | |
| Anchor point | N/A | GR10G23660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR07G00230 GR10G23660 | 2 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G360850 | 1 | |
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G066240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G066240 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS07G01450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G34614 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL02G04370 OL02G04380 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G04370 OL02G04380 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00403G00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00403G00220 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT11G14480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT11G14480 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_004G20610 PPE_005G24500 PPE_004G25250 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_005G24500 PPE_004G25250 | 2 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC28152G00510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28152G00510 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL10G007650 | 1 | |
| Anchor point | N/A | SL10G007650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G007650 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP7G00900 TP1G40220 | 2 | |
| Anchor point | N/A | TP1G40220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP1G40220 TP7G00900 | 2 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0006G05650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G05650 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV16G01200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G07050 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM07G07570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G07570 | 1 |