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Integrative Orthology Viewer:
AT1G53310
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G53310 | 1 |  |
| Tree-based ortholog | AT1G53310 | 1 | ||
| Anchor point | AT3G14940 AT2G42600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G53310 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00021G00280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00021G00280 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL1G48400 | 1 | |
| Anchor point | many-to-many | AL3G15710 AL1G48400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G48400 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G15760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G15760 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR08G01380 | 1 | |
| Anchor point | many-to-many | BR05G28100 BR03G34200 BR08G01380 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G01380 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_001G40550 | 1 | |
| Anchor point | many-to-many | CRU_001G40550 CRU_003G13880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G40550 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00097G01010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00052G01660 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR16G10660 CR11G03710 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR11G03710 CR16G10660 | 2 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL11G11510 | 1 | |
| Anchor point | many-to-1 | CL11G11510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G11510 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00421G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00421G00040 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00081G00520 | 1 | |
| Anchor point | many-to-1 | CM00081G00520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00081G00520 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0006G10000 | 1 | |
| Anchor point | many-to-1 | EG0006G10000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G10000 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G18530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G18530 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM06G33380 GM20G09810 GM13G34560 ... | 4 | |
| Anchor point | many-to-many | GM12G35840 GM13G34560 GM06G33380 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G43050 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR13G17350 GR02G06140 GR04G27210 | 3 | |
| Anchor point | many-to-many | GR02G06140 GR06G00130 GR13G17350 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G00130 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ3G004570 LJ3G016540 | 2 | |
| Anchor point | many-to-1 | LJ3G004570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G004570 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD11G023660 MD03G021040 | 2 | |
| Anchor point | many-to-many | MD03G021040 MD11G023660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G021040 MD11G023660 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME03741G00370 ME02610G00110 | 2 | |
| Anchor point | many-to-1 | ME03741G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03741G00370 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G463920 MT2G076670 | 2 | |
| Anchor point | many-to-1 | MT8G463920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G463920 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS01G55350 OS09G14670 OS08G27840 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G27840 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL12G03000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G03000 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00083G00770 PP00029G01390 PP00177G00330 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00029G01390 PP00169G00830 PP00083G00770 ... | 6 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT11G11070 PT01G39190 | 2 | |
| Anchor point | many-to-many | PT01G39190 PT11G11070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G39190 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_004G15880 | 1 | |
| Anchor point | many-to-1 | PPE_004G15880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G15880 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29645G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29983G02110 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL07G062530 SL10G007290 SL12G014250 | 3 | |
| Anchor point | many-to-many | SL07G062530 SL12G014250 SL10G007290 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G055060 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST07G024710 ST10G007910 ST12G005140 | 3 | |
| Anchor point | many-to-many | ST07G024710 ST10G007910 ST12G005140 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G022100 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP1G39890 | 1 | |
| Anchor point | many-to-many | TP1G39890 TP3G13150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G39890 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0007G10200 | 1 | |
| Anchor point | many-to-1 | TC0007G10200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G10200 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV19G01870 | 1 | |
| Anchor point | many-to-many | VV19G01870 VV12G02860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G02860 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM08G34600 ZM07G11120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G11120 | 1 |