Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G50430
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G50430 | 1 |  |
| Tree-based ortholog | AT1G50430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G50430 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00025G01900 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00025G01900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00025G01900 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G44900 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G44900 | 1 | ||
| Anchor point | N/A | AL1G44900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G44900 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G00250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G00250 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR08G02940 | 1 | |
| Tree-based ortholog | 1-to-many | BR00G06530 BR08G02940 | 2 | ||
| Anchor point | N/A | BR08G02940 BR05G18350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G02940 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G37550 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G37550 | 1 | ||
| Anchor point | N/A | CRU_001G37550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G37550 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00155G00150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00155G00150 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G00870 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G01310 | 1 | |
| Tree-based ortholog | 1-to-1 | CL09G01310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G01310 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00326G00240 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00326G00240 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00067G00670 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00067G00670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00067G00670 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G34440 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G34440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G34440 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G18140 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G18140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G18140 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM08G23970 | 1 | |
| Tree-based ortholog | 1-to-1 | GM07G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM08G23970 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G00270 | 1 | |
| Tree-based ortholog | 1-to-1 | GR11G00270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G00270 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD09G013200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G013200 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME02477G00450 | 1 | |
| Tree-based ortholog | 1-to-1 | ME02477G00450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02477G00450 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT4G094512 MT4G005450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G094512 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS02G26650 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G26650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G26650 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G03990 | 1 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00004G01560 PP00016G00600 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00016G00600 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G00520 PT10G25320 | 2 | |
| Tree-based ortholog | 1-to-many | PT08G00520 PT10G25320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G25320 PT08G00520 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_003G00980 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_003G00980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G00980 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30169G00360 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30169G00360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G00360 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G009310 | 1 | |
| Tree-based ortholog | 1-to-many | SL06G074090 SL01G009310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G009310 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G010220 | 1 | |
| Tree-based ortholog | 1-to-many | ST06G030060 ST01G010220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G010220 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G37260 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G37260 | 1 | ||
| Anchor point | N/A | TP1G37260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G37260 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0006G05730 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0006G05730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G05730 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV09G09570 | 1 | |
| Tree-based ortholog | 1-to-1 | VV09G09570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV09G09570 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM05G28080 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM05G28080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G28080 | 1 |