Integrative Orthology Viewer: AT1G49720 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G49720 | 1 | |
Tree-based ortholog | AT1G49720 | 1 | ||
Anchor point | AT3G19290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G49720 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00132G00190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00132G00190 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G44060 | 1 | |
Tree-based ortholog | 1-to-1 | AL1G44060 | 1 | ||
Anchor point | 1-to-many | AL1G44060 AL3G20840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G44060 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV7G02220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G02220 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR06G03490 | 1 | |
Tree-based ortholog | 1-to-1 | BR06G03490 | 1 | ||
Anchor point | 1-to-many | BR03G35870 BR06G03490 BR05G24320 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G03490 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G37020 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_001G37020 | 1 | ||
Anchor point | 1-to-many | CRU_003G18250 CRU_001G37020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G37020 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00062G00040 | 1 | |
Anchor point | 1-to-1 | CP00062G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00062G00040 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL02G06150 | 1 | |
Anchor point | 1-to-many | CL08G15640 CL02G06150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G06150 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00065G00190 | 1 | |
Anchor point | 1-to-1 | CS00065G00190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00065G00190 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00034G00630 | 1 | |
Anchor point | 1-to-1 | CM00034G00630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G02020 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0007G10470 | 1 | |
Anchor point | 1-to-many | EG0009G09010 EG0007G10470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G10470 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G32850 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G32850 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM07G33600 GM02G14880 | 2 | |
Anchor point | 1-to-1 | GM07G33600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G33600 GM02G14880 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR08G02470 GR05G23740 GR13G04450 | 3 | |
Anchor point | 1-to-many | GR09G21260 GR08G02470 GR13G04450 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G02470 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ4G005140 LJ6G029550 LJ5G032220 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G066380 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD05G023670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD05G023670 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME07750G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07750G00010 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-1 | MT4G085910 | 1 | |
Anchor point | 1-to-1 | MT4G085910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G085910 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS09G28310 OS08G36790 | 2 | |
Anchor point | 1-to-1 | OS08G36790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G64000 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00009G01290 PP00049G00710 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00009G01290 PP00049G00710 | 2 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT04G14060 PT09G10120 | 2 | |
Anchor point | 1-to-many | PT04G14060 PT09G10120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G14060 | 1 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_008G14590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G14590 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29801G01200 | 1 | |
Anchor point | 1-to-1 | RC29801G01200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G01200 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL11G044560 | 1 | |
Tree-based ortholog | 1-to-many | SL01G108080 SL11G044560 SL10G050210 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G108080 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST11G016950 | 1 | |
Tree-based ortholog | 1-to-many | ST01G045240 ST11G016950 ST10G016870 | 3 | ||
Anchor point | 1-to-many | ST01G045240 ST10G016870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G016950 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP1G36610 | 1 | |
Anchor point | 1-to-many | TP3G17370 TP1G36610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G36610 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0002G09780 | 1 | |
Anchor point | 1-to-1 | TC0002G09780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G09780 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV18G07060 | 1 | |
Anchor point | 1-to-1 | VV03G06590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G07060 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM01G35090 ZM04G11120 ZM02G31620 | 3 | |
Anchor point | 1-to-1 | ZM01G35090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G41550 | 1 |