Integrative Orthology Viewer: AT1G49620 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G49620 | 1 | |
Tree-based ortholog | AT1G49620 | 1 | ||
Anchor point | AT3G19150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G49620 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00126G00330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00126G00330 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G43900 | 1 | |
Tree-based ortholog | 1-to-1 | AL1G43900 | 1 | ||
Anchor point | 1-to-many | AL3G20680 AL1G43900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G43900 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G03660 | 1 | |
Anchor point | 1-to-1 | BV0G03660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G03660 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR06G03370 | 1 | |
Tree-based ortholog | 1-to-1 | BR03G35810 | 1 | ||
Anchor point | 1-to-many | BR03G35810 BR06G03370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G03370 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G36910 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_001G36910 | 1 | ||
Anchor point | 1-to-many | CRU_003G18100 CRU_001G36910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G36910 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00062G00280 | 1 | |
Anchor point | 1-to-1 | CP00062G00280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00062G00280 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL07G00420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G08520 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00598G00070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00598G00070 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00034G00450 | 1 | |
Anchor point | 1-to-1 | CM00034G00450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G00450 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0008G16580 | 1 | |
Anchor point | 1-to-1 | EG0008G16580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G10690 EG0005G12230 | 2 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G33420 | 1 | |
Anchor point | 1-to-many | FV3G33420 FV1G18530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G33420 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM02G15100 GM07G33360 | 2 | |
Anchor point | 1-to-many | GM07G33360 GM01G39220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G33360 GM02G15100 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR13G04260 GR05G23890 GR02G00740 | 3 | |
Anchor point | 1-to-many | GR02G00740 GR13G04260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G00740 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G012370 | 1 | |
Anchor point | 1-to-1 | LJ4G012370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G012370 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD00G168270 MD00G061090 MD00G510880 | 3 | |
Anchor point | 1-to-many | MD15G021790 MD02G015110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G168270 MD00G061090 MD00G510880 | 3 | ||
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME04393G00030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03175G00090 ME00319G00020 | 2 | ||
Medicago truncatula | Tree-based ortholog | 1-to-1 | MT5G017600 | 1 | |
Anchor point | 1-to-1 | MT4G086450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G017600 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS11G40030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G33310 | 1 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT09G10360 PT04G14210 | 2 | |
Anchor point | 1-to-many | PT04G14210 PT05G13750 PT09G10360 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G14210 PT09G10360 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G00600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G00600 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29801G01480 | 1 | |
Anchor point | 1-to-1 | RC29801G01480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G01480 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL01G108610 | 1 | |
Anchor point | 1-to-many | SL01G108610 SL02G090680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G108610 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST01G045850 | 1 | |
Anchor point | 1-to-many | ST01G045850 ST02G032160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G045850 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G36490 | 1 | |
Tree-based ortholog | 1-to-1 | TP1G36490 | 1 | ||
Anchor point | 1-to-many | TP3G17220 TP1G36490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G36490 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0002G09450 | 1 | |
Anchor point | 1-to-1 | TC0002G09450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G09450 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV03G06910 | 1 | |
Anchor point | 1-to-1 | VV03G06910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV07G05650 VV03G06910 | 2 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM04G02170 ZM09G01490 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G02910 | 1 |