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Integrative Orthology Viewer:
AT1G48410
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G48410 AT1G69440 AT2G27880 ... | 4 |  |
| Tree-based ortholog | AT1G48410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G48410 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00002G04960 ATR_00002G05600 ATR_00024G02670 ... | 6 | |
| Tree-based ortholog | 1-to-many | ATR_00002G05600 ATR_00024G02670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00044G00240 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G42040 AL4G12250 AL8G06220 | 3 | |
| Tree-based ortholog | 1-to-1 | AL1G42040 | 1 | ||
| Anchor point | N/A | AL1G42040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G42040 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV8G03610 BV8G13460 BV9G08230 ... | 4 | |
| Tree-based ortholog | 1-to-many | BV8G13460 BV8G03610 BV3G00590 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G13460 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G18720 BR06G38500 BR07G12750 ... | 4 | |
| Tree-based ortholog | 1-to-1 | BR05G18720 | 1 | ||
| Anchor point | N/A | BR08G04060 BR05G18720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR08G04060 BR05G18720 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G35570 CRU_004G08430 CRU_008G04740 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_001G35570 | 1 | ||
| Anchor point | N/A | CRU_001G35570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G35570 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00044G01280 CP00047G00310 CP00075G00840 | 3 | |
| Tree-based ortholog | 1-to-many | CP00075G00840 CP46512G00010 CP00044G01280 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00044G01280 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR16G12740 CR04G01830 CR02G13380 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR16G12740 CR04G01830 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G10420 CL04G12330 CL05G24970 ... | 4 | |
| Tree-based ortholog | 1-to-many | CL05G05290 CL06G11120 CL04G12330 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G12330 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00003G04820 CS00011G00040 CS00595G00150 ... | 8 | |
| Tree-based ortholog | 1-to-many | CS00011G00040 CS00674G00020 CS00008G02580 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00674G00020 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00001G00460 CM00004G01770 CM00006G05970 ... | 5 | |
| Tree-based ortholog | 1-to-many | CM00001G00460 CM00006G05970 CM00077G00070 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G00460 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G32860 EG0002G32880 EG0008G04550 ... | 5 | |
| Tree-based ortholog | 1-to-1 | EG0008G05310 | 1 | ||
| Anchor point | N/A | EG0011G19160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G19160 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV3G16730 FV3G16740 FV4G06330 ... | 5 | |
| Tree-based ortholog | 1-to-1 | FV5G15720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G15720 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G00510 GM04G21450 GM05G08170 ... | 12 | |
| Tree-based ortholog | 1-to-many | GM09G29720 GM16G34300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G34300 GM09G29720 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR06G10300 GR06G10310 GR06G18940 ... | 8 | |
| Tree-based ortholog | 1-to-many | GR09G44670 GR06G18940 | 2 | ||
| Anchor point | N/A | GR06G18940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G29410 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ2G008400 LJ3G043280 LJ5G034400 | 3 | |
| Tree-based ortholog | 1-to-1 | LJ2G008400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G008400 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G002600 MD00G007360 MD00G059880 ... | 11 | |
| Tree-based ortholog | 1-to-many | MD00G383790 MD00G007360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G022670 MD00G383790 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01551G01670 ME05859G00080 ME06968G00060 ... | 6 | |
| Tree-based ortholog | 1-to-many | ME01551G01670 ME10563G00410 ME07478G00630 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME01551G01670 ME10563G00410 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G041345 MT1G102630 MT2G059590 ... | 8 | |
| Tree-based ortholog | 1-to-1 | MT6G477980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G477980 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G07310 OS02G45070 OS02G58490 ... | 11 | |
| Tree-based ortholog | 1-to-many | OS04G47870 OS02G07310 OS06G39640 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS02G45070 OS04G47870 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00019G00790 PP00110G00400 PP00433G00150 | 3 | |
| Tree-based ortholog | 1-to-many | PP00028G00960 PP00173G00690 PP00007G01010 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00007G01010 PP00028G00960 PP00173G00690 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G21370 PT06G11860 PT08G15880 ... | 7 | |
| Tree-based ortholog | 1-to-many | PT15G02900 PT12G03710 PT10G08130 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT12G03710 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G02250 PPE_005G24220 PPE_005G24230 ... | 4 | |
| Tree-based ortholog | 1-to-1 | PPE_005G24230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G24230 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29589G00720 RC29677G00060 RC29807G00090 ... | 5 | |
| Tree-based ortholog | 1-to-many | RC29677G00060 RC29807G00090 RC29844G00570 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29677G00060 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G098280 SL06G072300 SL06G074730 ... | 5 | |
| Tree-based ortholog | 1-to-many | SL03G098280 SL06G072300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G072300 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G022990 ST06G028680 ST06G030960 ... | 5 | |
| Tree-based ortholog | 1-to-many | ST06G028680 ST03G022990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G028680 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G27100 TP1G35360 TP2G08610 ... | 5 | |
| Tree-based ortholog | 1-to-1 | TP1G35360 | 1 | ||
| Anchor point | N/A | TP1G35360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G35360 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G09020 TC0001G09040 TC0003G07200 ... | 6 | |
| Tree-based ortholog | 1-to-many | TC0004G24300 TC0003G07200 TC0009G11320 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G07200 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV05G05540 VV06G08550 VV08G11040 ... | 5 | |
| Tree-based ortholog | 1-to-1 | VV17G09820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G09820 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G46300 ZM02G06980 ZM02G35090 ... | 12 | |
| Tree-based ortholog | 1-to-many | ZM09G13210 ZM02G06980 ZM05G16410 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G06980 ZM10G22260 | 2 |