Integrative Orthology Viewer: AT1G48030 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G48030 AT3G17240 | 2 | |
Tree-based ortholog | AT1G48030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G48030 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00014G01110 ATR_00064G00490 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00064G00490 ATR_00014G01110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00014G01110 ATR_00064G00490 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G41580 AL3G18570 | 2 | |
Tree-based ortholog | 1-to-1 | AL1G41580 | 1 | ||
Anchor point | N/A | AL3G18570 AL1G41580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G41580 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G17330 | 1 | |
Tree-based ortholog | 1-to-1 | BV3G17330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G17330 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR05G26360 BR06G04490 | 2 | |
Tree-based ortholog | 1-to-1 | BR06G04490 | 1 | ||
Anchor point | N/A | BR05G26360 BR03G34900 BR06G04490 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G04490 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G35140 CRU_003G16200 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_001G35140 | 1 | ||
Anchor point | N/A | CRU_003G15920 CRU_001G35140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G35140 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00146G00670 | 1 | |
Tree-based ortholog | 1-to-1 | CP00146G00670 | 1 | ||
Anchor point | N/A | CP00146G00670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00146G00670 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR00G02240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR00G02240 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G07570 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G07570 | 1 | ||
Anchor point | N/A | CL05G07570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G07570 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00016G01940 | 1 | |
Tree-based ortholog | 1-to-1 | CS00016G01940 | 1 | ||
Anchor point | N/A | CS00016G01940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00016G01940 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G08430 CM00047G01190 | 2 | |
Tree-based ortholog | 1-to-many | CM00006G08430 CM00047G01190 | 2 | ||
Anchor point | N/A | CM00006G08430 CM00047G01190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G08430 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G33070 | 1 | |
Tree-based ortholog | 1-to-1 | EG0008G33070 | 1 | ||
Anchor point | N/A | EG0008G33070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G33070 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G38110 | 1 | |
Tree-based ortholog | 1-to-1 | FV3G38110 | 1 | ||
Anchor point | N/A | FV3G38110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G38110 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G36040 GM17G04210 | 2 | |
Tree-based ortholog | 1-to-many | GM17G04210 GM07G36040 | 2 | ||
Anchor point | N/A | GM17G04210 GM07G36040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G04210 GM07G36040 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR05G06940 | 1 | |
Tree-based ortholog | 1-to-1 | GR05G06940 | 1 | ||
Anchor point | N/A | GR05G06940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G06940 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G019610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G019610 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G054800 | 1 | |
Tree-based ortholog | 1-to-many | MD00G327120 MD00G042420 MD00G054800 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G327120 MD00G054800 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME00708G00110 | 1 | |
Tree-based ortholog | 1-to-1 | ME00708G00110 | 1 | ||
Anchor point | N/A | ME00708G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00708G00110 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G123070 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G123070 | 1 | ||
Anchor point | N/A | MT4G123070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G123070 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G22520 OS05G06750 | 2 | |
Tree-based ortholog | 1-to-many | OS05G06750 OS01G22520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G22520 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL11G02870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G02870 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00269G00450 PP00098G00740 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00098G00740 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT08G10080 | 1 | |
Tree-based ortholog | 1-to-many | PT10G15140 PT08G10080 | 2 | ||
Anchor point | N/A | PT10G15140 PT08G10080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G10080 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G10540 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G10540 | 1 | ||
Anchor point | N/A | PPE_001G10540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G10540 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29889G01220 | 1 | |
Tree-based ortholog | 1-to-1 | RC29889G01220 | 1 | ||
Anchor point | N/A | RC29889G01220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29889G01220 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G053300 SL12G099100 | 2 | |
Tree-based ortholog | 1-to-many | SL12G099100 SL05G053300 | 2 | ||
Anchor point | N/A | SL12G099100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G053300 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G025970 ST12G031040 | 2 | |
Tree-based ortholog | 1-to-many | ST12G031040 ST05G025970 | 2 | ||
Anchor point | N/A | ST12G031040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G025970 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G35010 TP3G15460 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G35010 | 1 | ||
Anchor point | N/A | TP1G35010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G35010 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G30790 | 1 | |
Tree-based ortholog | 1-to-1 | TC0004G30790 | 1 | ||
Anchor point | N/A | TC0004G30790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G30790 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G02060 | 1 | |
Tree-based ortholog | 1-to-1 | VV05G02060 | 1 | ||
Anchor point | N/A | VV05G02060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G02060 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM08G07660 | 1 | |
Tree-based ortholog | 1-to-many | ZM06G19210 ZM08G07660 ZM03G11620 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G07660 | 1 |