Integrative Orthology Viewer: AT1G35610 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G35610 AT2G17590 AT3G11385 | 3 | |
Tree-based ortholog | AT1G35610 AT3G13760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G11390 AT2G17600 AT3G11402 ... | 6 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00044G00410 ATR_00044G00400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00044G00410 ATR_00044G00400 | 2 | ||
Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL4G01030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G44600 | 1 | ||
Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G01980 | 1 | |
Brassica rapa | Tree-based ortholog | many-to-many | BR02G28850 BR05G29840 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G29840 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G15780 | 1 | |
Tree-based ortholog | many-to-1 | CRU_002G05800 | 1 | ||
Anchor point | N/A | CRU_006G26940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G30480 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-many | CP00012G00460 CP00681G00010 CP00012G00420 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00012G00460 CP00012G00420 CP00012G00470 ... | 7 | ||
Citrullus lanatus | Tree-based ortholog | many-to-many | CL05G19980 CL05G20010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G19980 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-many | CS00222G00040 CS03672G00010 CS01003G00010 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CS00063G00330 CS00008G00810 CS00101G00360 ... | 7 | ||
Cucumis melo | Tree-based ortholog | many-to-many | CM01596G05400 CM01596G05430 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM01596G05400 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0004G17740 EG0004G17720 EG0004G17710 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0005G03510 EG0005G03550 | 2 | ||
Fragaria vesca | Tree-based ortholog | many-to-many | FV3G03940 FV6G43220 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV6G43220 FV3G03940 FV3G03890 ... | 5 | ||
Glycine max | Tree-based ortholog | many-to-many | GM19G33040 GM03G30150 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM03G30150 GM19G33040 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-many | GR05G03750 GR05G03730 GR05G03400 ... | 73 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR05G03730 GR05G03810 GR03G13110 ... | 9 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ1G059840 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G059840 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD00G351960 MD00G257560 MD14G004830 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD13G028450 MD14G004830 MD00G257560 ... | 5 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME03602G00030 ME00823G00030 ME00823G00040 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME00823G00040 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00096G00950 PP00108G00170 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00365G00030 PP00096G00950 | 2 | ||
Populus trichocarpa | Tree-based ortholog | many-to-many | PT16G04700 PT16G04460 PT00G04130 ... | 13 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT00G04140 PT16G04480 PT00G04130 ... | 12 | ||
Prunus persica | Tree-based ortholog | many-to-many | PPE_007G08810 PPE_007G08830 PPE_007G11450 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G09170 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-many | RC30170G02400 RC29765G00320 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29613G00160 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-many | SL01G073800 SL01G073820 SL01G073810 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G073840 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-1 | ST10G020250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G027130 | 1 | ||
Thellungiella parvula | Tree-based ortholog | many-to-1 | TP7G11380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G05840 | 1 | ||
Theobroma cacao | Tree-based ortholog | many-to-many | TC0005G18600 TC0005G18570 TC0005G18590 ... | 28 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0005G18600 TC0005G18590 TC0005G18570 | 3 | ||
Vitis vinifera | Tree-based ortholog | many-to-1 | VV06G06850 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV06G06850 | 1 |