Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G33960
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G33960 | 1 |  |
| Tree-based ortholog | AT1G33960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G33960 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00071G01970 ATR_00071G01980 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00071G01970 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G35220 | 1 | |
| Tree-based ortholog | 1-to-many | AL1G35210 AL1G35170 AL1G35200 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G35250 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G72010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G72010 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR09G25860 BR05G20120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR05G20120 BR09G25860 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G30560 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_001G30520 CRU_001G30560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G30560 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00471G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00471G00030 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL01G06660 CL11G02760 CL10G20130 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G02760 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS01857G00010 CS02129G00010 CS02408G00010 ... | 14 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00363G00140 CS02426G00010 | 2 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00005G01720 CM00011G00710 CM00011G00720 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G01720 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0006G24990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G24990 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G28260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G28260 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM06G46920 GM06G47840 GM08G25940 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G00270 GM08G25940 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR05G11640 GR13G13510 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G13510 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G033640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G033640 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD15G033380 MD00G368850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G033380 MD00G368850 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME00832G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00832G00010 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT4G032220 MT4G032240 MT4G032350 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT4G032220 MT4G032240 | 2 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G35130 OS04G36030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G35130 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00001G01450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00001G01450 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT19G07730 PT13G10480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT19G07730 PT13G10480 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G56580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G56580 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30170G07790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G07790 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL06G064930 SL06G064920 SL11G028010 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G028010 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST06G020060 ST06G020080 ST06G020090 ... | 11 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G020150 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G29220 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G29190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G29220 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0008G19470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G19470 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV18G13770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G13770 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G30770 ZM04G16500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G30770 ZM04G16500 | 2 |