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Integrative Orthology Viewer:
AT1G28130
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G23160 AT1G28130 AT1G48660 ... | 17 |  |
| Tree-based ortholog | AT1G28130 | 1 | ||
| Anchor point | AT5G13320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G28130 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G05460 ATR_00016G02310 ATR_00043G00720 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ATR_00045G02570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G02310 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G24930 AL1G29270 AL1G42370 ... | 15 | |
| Tree-based ortholog | 1-to-1 | AL1G29270 | 1 | ||
| Anchor point | 1-to-many | AL6G13050 AL1G29270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G29270 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G48920 BV6G23010 BV7G13380 ... | 4 | |
| Tree-based ortholog | 1-to-1 | BV7G13380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G23010 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G02010 BR00G03100 BR00G10320 ... | 38 | |
| Tree-based ortholog | 1-to-many | BR07G07090 BR09G18100 | 2 | ||
| Anchor point | 1-to-many | BR02G06300 BR07G07090 BR09G18100 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G07090 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G21800 CRU_001G25500 CRU_001G35850 ... | 18 | |
| Tree-based ortholog | 1-to-1 | CRU_001G25500 | 1 | ||
| Anchor point | 1-to-1 | CRU_001G25500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G25500 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00006G00720 CP00009G01990 CP00292G00010 ... | 5 | |
| Tree-based ortholog | 1-to-1 | CP00009G01990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00292G00010 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G17480 CL01G17490 CL05G11680 ... | 6 | |
| Tree-based ortholog | 1-to-1 | CL07G13980 | 1 | ||
| Anchor point | 1-to-1 | CL07G13980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G13980 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G07920 CS00006G01460 CS00012G01530 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CS00001G07920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00333G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00007G06240 CM00007G06250 CM00009G01730 ... | 8 | |
| Tree-based ortholog | 1-to-1 | CM00031G02980 | 1 | ||
| Anchor point | 1-to-1 | CM00031G02980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00031G02980 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G28760 EG0007G14930 EG0008G18210 ... | 6 | |
| Tree-based ortholog | 1-to-1 | EG0011G29320 | 1 | ||
| Anchor point | 1-to-1 | EG0007G14930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G14930 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G17270 FV2G03800 FV2G27680 ... | 6 | |
| Tree-based ortholog | 1-to-1 | FV2G27680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G20280 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G39780 GM02G13910 GM02G17360 ... | 16 | |
| Tree-based ortholog | 1-to-many | GM10G02440 GM02G17360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G02440 GM02G17360 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G07950 GR02G07960 GR02G10740 ... | 26 | |
| Tree-based ortholog | 1-to-1 | GR07G12920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G19770 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ2G019920 LJ2G032110 LJ4G015600 | 3 | |
| Tree-based ortholog | 1-to-many | LJ2G032110 LJ4G015600 LJ2G019920 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G019920 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G143680 MD00G206430 MD00G392610 ... | 12 | |
| Tree-based ortholog | 1-to-many | MD03G024240 MD11G027820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G143680 MD13G010780 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04457G00960 ME06137G00190 ME06612G00060 ... | 8 | |
| Tree-based ortholog | 1-to-1 | ME04457G00960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06137G00190 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT00G20130 MT1G088765 MT2G081860 ... | 6 | |
| Tree-based ortholog | 1-to-1 | MT1G088765 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G467000 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G55940 OS01G57610 OS05G42150 ... | 9 | |
| Tree-based ortholog | 1-to-1 | OS07G47490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G47490 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00323G00320 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00323G00320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00067G01090 PP00323G00320 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G06900 PT01G29830 PT01G41040 ... | 9 | |
| Tree-based ortholog | 1-to-1 | PT02G20640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G06900 PT03G16130 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G22110 PPE_004G18820 PPE_006G23510 ... | 5 | |
| Tree-based ortholog | 1-to-1 | PPE_008G27040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G22110 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27533G00020 RC28152G00010 RC29970G00370 ... | 5 | |
| Tree-based ortholog | 1-to-1 | RC30129G00160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G04750 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G107390 SL02G064830 SL02G092820 ... | 6 | |
| Tree-based ortholog | 1-to-many | SL07G053030 SL07G063850 SL12G005310 ... | 10 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G107390 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G044550 ST02G031290 ST06G015220 ... | 12 | |
| Tree-based ortholog | 1-to-many | ST07G020810 ST07G026480 ST12G012570 ... | 14 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G044550 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G05640 TP1G20620 TP1G24320 ... | 12 | |
| Tree-based ortholog | 1-to-1 | TP1G24320 | 1 | ||
| Anchor point | 1-to-many | TP1G24320 TP6G30640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G24320 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G06300 TC0001G29520 TC0002G09580 ... | 17 | |
| Tree-based ortholog | 1-to-1 | TC0001G29520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G18550 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G01380 VV03G10340 VV07G00620 ... | 6 | |
| Tree-based ortholog | 1-to-1 | VV07G08020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G01380 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G18610 ZM02G38180 ZM02G42790 ... | 8 | |
| Tree-based ortholog | 1-to-1 | ZM07G29860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G42790 | 1 |