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Integrative Orthology Viewer:
AT1G27900
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G26370 AT1G27900 AT2G47250 ... | 8 |  |
| Tree-based ortholog | AT1G27900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G27900 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00005G01130 ATR_00019G01410 ATR_00021G01190 ... | 6 | |
| Tree-based ortholog | 1-to-1 | ATR_00005G01130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00005G01130 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G20690 AL5G33380 AL6G12710 ... | 5 | |
| Tree-based ortholog | 1-to-many | AL5G05180 AL1G34690 AL8G04790 ... | 13 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G12710 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G09390 BV0G78210 BV1G03970 ... | 9 | |
| Tree-based ortholog | 1-to-1 | BV6G12090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G12090 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G09580 BR01G19230 BR02G06140 ... | 11 | |
| Tree-based ortholog | 1-to-1 | BR08G22130 | 1 | ||
| Anchor point | N/A | BR08G22130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G22130 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G23660 CRU_001G25280 CRU_005G27590 ... | 8 | |
| Tree-based ortholog | 1-to-1 | CRU_001G25280 | 1 | ||
| Anchor point | N/A | CRU_001G25280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G25280 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00001G01360 CP00007G00240 CP00018G00860 ... | 7 | |
| Tree-based ortholog | 1-to-many | CP00151G00360 CP00104G00140 CP00003G04450 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00701G00010 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR00G01370 CR03G09190 CR07G04240 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CR12G08010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G08720 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL02G16550 CL03G07630 CL06G16340 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CL08G16810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G16810 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G06260 CS00003G00770 CS00003G00870 ... | 8 | |
| Tree-based ortholog | 1-to-1 | CS00003G00870 | 1 | ||
| Anchor point | N/A | CS00003G00770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G00870 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00001G07500 CM00003G04670 CM00014G00800 ... | 6 | |
| Tree-based ortholog | 1-to-1 | CM00014G00800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G04670 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G20440 EG0007G18700 EG0008G07850 ... | 5 | |
| Tree-based ortholog | 1-to-1 | EG0008G37720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G37720 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G03950 FV0G12360 FV0G36320 ... | 16 | |
| Tree-based ortholog | 1-to-1 | FV0G12360 | 1 | ||
| Anchor point | N/A | FV0G12360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G12360 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G07530 GM02G01390 GM02G13171 ... | 12 | |
| Tree-based ortholog | 1-to-1 | GM05G27850 | 1 | ||
| Anchor point | N/A | GM05G27850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM05G27850 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G17010 GR08G13780 GR08G17650 ... | 7 | |
| Tree-based ortholog | 1-to-1 | GR05G17010 | 1 | ||
| Anchor point | N/A | GR05G19460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G17010 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ3G024020 LJ6G026060 | 2 | |
| Tree-based ortholog | 1-to-1 | LJ4G050860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G024020 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G205070 MD00G427570 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G382840 MD15G035610 MD12G003650 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G205070 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00109G00320 ME03874G00090 ME04851G00810 ... | 7 | |
| Tree-based ortholog | 1-to-1 | ME07543G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07543G00370 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT00G13760 MT1G010030 MT1G086640 ... | 15 | |
| Tree-based ortholog | 1-to-1 | MT8G080240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G080240 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G11370 OS02G19860 OS03G19960 ... | 9 | |
| Tree-based ortholog | 1-to-1 | OS11G20554 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G20554 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL01G02960 OL01G03400 OL04G02160 ... | 7 | |
| Tree-based ortholog | 1-to-1 | OL01G02960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G02960 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00018G01360 PP00018G01400 PP00043G00300 ... | 8 | |
| Tree-based ortholog | 1-to-1 | PP00124G00030 | 1 | ||
| Anchor point | N/A | PP00036G01040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00124G00030 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G19250 PT04G05270 PT08G09680 ... | 7 | |
| Tree-based ortholog | 1-to-1 | PT10G05720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G05720 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G07590 PPE_001G23800 PPE_001G24270 ... | 17 | |
| Tree-based ortholog | 1-to-1 | PPE_001G24270 | 1 | ||
| Anchor point | N/A | PPE_001G23800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G42700 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27632G00040 RC28644G00480 RC29615G00130 ... | 7 | |
| Tree-based ortholog | 1-to-1 | RC29929G01950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G01950 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G079250 SL03G115390 SL05G015040 ... | 8 | |
| Tree-based ortholog | 1-to-1 | SL05G015040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G015040 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G023520 ST03G028870 ST05G016060 ... | 9 | |
| Tree-based ortholog | 1-to-1 | ST05G016060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G016060 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G22320 TP1G24080 TP1G28420 ... | 9 | |
| Tree-based ortholog | 1-to-1 | TP1G24080 | 1 | ||
| Anchor point | N/A | TP1G24080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G24080 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G31590 TC0002G27550 TC0002G32850 ... | 7 | |
| Tree-based ortholog | 1-to-1 | TC0002G27550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G27550 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G00180 VV01G03980 VV07G09530 ... | 6 | |
| Tree-based ortholog | 1-to-1 | VV01G03980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G03980 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G13700 ZM01G33580 ZM02G36040 ... | 10 | |
| Tree-based ortholog | 1-to-many | ZM09G03120 ZM09G03110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G23900 | 1 |