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Integrative Orthology Viewer:
AT1G25450
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G01120 AT1G19440 AT1G25450 ... | 15 |  |
| Tree-based ortholog | AT1G25450 | 1 | ||
| Anchor point | AT1G68530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G25450 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00002G05340 ATR_00007G03790 ATR_00014G00920 ... | 7 | |
| Tree-based ortholog | 1-to-many | ATR_00129G00700 ATR_00129G00670 ATR_00079G01180 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00135G00670 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G01250 AL1G03550 AL1G20510 ... | 16 | |
| Tree-based ortholog | 1-to-1 | AL1G27720 | 1 | ||
| Anchor point | 1-to-many | AL1G27720 AL2G16720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G27720 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G15160 BV0G58150 BV0G78940 ... | 10 | |
| Tree-based ortholog | 1-to-1 | BV0G78940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G07090 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G06970 BR01G03890 BR03G39730 ... | 22 | |
| Tree-based ortholog | 1-to-1 | BR07G22740 | 1 | ||
| Anchor point | 1-to-many | BR07G22740 BR09G29480 BR02G19210 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G22740 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G00990 CRU_001G03130 CRU_001G18210 ... | 16 | |
| Tree-based ortholog | 1-to-1 | CRU_001G24040 | 1 | ||
| Anchor point | 1-to-many | CRU_001G24040 CRU_002G14150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G24040 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00019G00310 CP00058G00040 CP00058G00050 ... | 9 | |
| Tree-based ortholog | 1-to-1 | CP00019G00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G00310 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR17G05760 | 1 | |
| Tree-based ortholog | 1-to-1 | CR17G05760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G05760 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL05G00600 CL05G05210 CL05G17190 ... | 6 | |
| Tree-based ortholog | 1-to-1 | CL05G23800 | 1 | ||
| Anchor point | 1-to-1 | CL05G23800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G23800 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G04930 CS00002G04290 CS00005G03250 ... | 14 | |
| Tree-based ortholog | 1-to-1 | CS00019G00310 | 1 | ||
| Anchor point | 1-to-1 | CS00019G00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G00310 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00006G00620 CM00006G05870 CM00014G02970 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CM00016G05820 | 1 | ||
| Anchor point | 1-to-1 | CM00016G05820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G05820 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G14400 EG0003G24940 EG0003G32220 ... | 17 | |
| Tree-based ortholog | 1-to-1 | EG0007G17700 | 1 | ||
| Anchor point | 1-to-1 | EG0007G17700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G17700 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G01700 FV1G06340 FV2G01850 ... | 8 | |
| Tree-based ortholog | 1-to-1 | FV0G01700 | 1 | ||
| Anchor point | 1-to-1 | FV0G01700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G01700 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G00380 GM03G42140 GM04G06110 ... | 21 | |
| Tree-based ortholog | 1-to-many | GM10G42100 GM20G24930 GM08G30140 | 3 | ||
| Anchor point | 1-to-many | GM20G24930 GM10G42100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G24930 GM10G42100 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G15090 GR02G00550 GR02G00560 ... | 17 | |
| Tree-based ortholog | 1-to-1 | GR02G21850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G21850 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G025400 LJ1G031030 LJ1G074940 ... | 7 | |
| Tree-based ortholog | 1-to-1 | LJ2G018260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G018260 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G009130 MD00G015990 MD00G039820 ... | 21 | |
| Tree-based ortholog | 1-to-many | MD16G001700 MD15G004640 MD00G243370 ... | 5 | ||
| Anchor point | 1-to-1 | MD16G001700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD16G001700 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01313G00010 ME01463G00010 ME01551G01520 ... | 19 | |
| Tree-based ortholog | 1-to-1 | ME08359G00120 | 1 | ||
| Anchor point | 1-to-1 | ME08359G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08359G00120 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G041085 MT1G076430 MT1G110930 ... | 16 | |
| Tree-based ortholog | 1-to-many | MT5G056510 MT1G110930 | 2 | ||
| Anchor point | 1-to-1 | MT1G110930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G110930 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G34560 OS02G11070 OS02G49920 ... | 16 | |
| Tree-based ortholog | 1-to-many | OS02G49920 OS06G14810 OS06G15020 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G12030 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00007G01460 PP00008G00460 PP00021G00410 ... | 13 | |
| Tree-based ortholog | 1-to-many | PP00007G01460 PP00028G00180 PP00034G01640 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00007G01460 PP00034G01640 PP00028G00180 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G17800 PT04G15560 PT06G08040 ... | 20 | |
| Tree-based ortholog | 1-to-many | PT08G12030 PT10G12530 | 2 | ||
| Anchor point | 1-to-many | PT10G12530 PT08G12030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G12530 PT08G12030 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G02520 PPE_001G32010 PPE_001G38680 ... | 8 | |
| Tree-based ortholog | 1-to-1 | PPE_001G32010 | 1 | ||
| Anchor point | 1-to-1 | PPE_001G32010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G11450 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27524G00120 RC27964G00170 RC29739G00850 ... | 10 | |
| Tree-based ortholog | 1-to-1 | RC27524G00120 | 1 | ||
| Anchor point | 1-to-1 | RC27524G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27524G00120 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G063140 SL03G005320 SL04G080450 ... | 15 | |
| Tree-based ortholog | 1-to-1 | SL02G063140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G063140 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G010830 ST02G029020 ST03G005540 ... | 17 | |
| Tree-based ortholog | 1-to-many | ST02G010830 ST02G029020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST02G029020 ST02G010830 | 2 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G01150 TP1G03040 TP1G17330 ... | 16 | |
| Tree-based ortholog | 1-to-many | TP5G23600 TP5G23610 | 2 | ||
| Anchor point | 1-to-many | TP1G22760 TP5G23600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G23600 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G33290 TC0002G08060 TC0002G23080 ... | 13 | |
| Tree-based ortholog | 1-to-1 | TC0002G23080 | 1 | ||
| Anchor point | 1-to-1 | TC0002G23080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G23080 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G09190 VV04G11420 VV09G10390 ... | 5 | |
| Tree-based ortholog | 1-to-many | VV01G07790 VV14G08140 | 2 | ||
| Anchor point | 1-to-1 | VV01G07790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G05920 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G04410 ZM01G05590 ZM01G08220 ... | 20 | |
| Tree-based ortholog | 1-to-many | ZM04G24010 ZM06G17490 ZM09G07330 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G08220 | 1 |