Integrative Orthology Viewer: AT1G23870 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G06410 AT1G23870 AT1G60140 ... | 7 | |
Tree-based ortholog | AT1G23870 | 1 | ||
Anchor point | AT1G70290 AT1G60140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G23870 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00006G03190 ATR_00007G01970 ATR_00048G00280 ... | 5 | |
Tree-based ortholog | 1-to-1 | ATR_00006G03190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G03190 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G05990 AL1G25680 AL2G05940 ... | 6 | |
Tree-based ortholog | 1-to-1 | AL1G25680 | 1 | ||
Anchor point | many-to-many | AL2G18690 AL1G25680 AL2G05940 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G25680 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G09860 BV5G02650 BV5G17890 ... | 5 | |
Tree-based ortholog | 1-to-1 | BV6G10120 | 1 | ||
Anchor point | many-to-many | BV6G10120 BV5G02650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G10120 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G25110 BR02G20280 BR03G44110 ... | 8 | |
Tree-based ortholog | 1-to-1 | BR08G23770 | 1 | ||
Anchor point | many-to-many | BR01G25110 BR02G20280 BR08G23770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G23770 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G05420 CRU_001G22430 CRU_002G04830 ... | 7 | |
Tree-based ortholog | 1-to-1 | CRU_001G22430 | 1 | ||
Anchor point | many-to-many | CRU_002G16030 CRU_001G22430 CRU_002G04830 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G22430 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00002G01600 CP00007G01180 CP00075G00080 ... | 6 | |
Tree-based ortholog | 1-to-1 | CP02573G00010 | 1 | ||
Anchor point | many-to-1 | CP00124G00290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00002G01600 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G07790 | 1 | |
Tree-based ortholog | 1-to-1 | CR06G07790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G07790 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G24010 CL05G26090 CL06G17450 ... | 5 | |
Tree-based ortholog | 1-to-1 | CL05G26090 | 1 | ||
Anchor point | many-to-many | CL05G26090 CL06G17450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G26090 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G02810 CS00007G01420 CS00020G01660 ... | 6 | |
Tree-based ortholog | 1-to-1 | CS00003G02810 | 1 | ||
Anchor point | many-to-many | CS00048G00780 CS00020G01660 CS00003G02810 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G02810 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G02160 CM00016G03270 CM00021G01440 ... | 6 | |
Tree-based ortholog | 1-to-1 | CM00016G03270 | 1 | ||
Anchor point | many-to-many | CM00016G03270 CM00007G02160 CM00030G00260 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G03270 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G16020 EG0002G02990 EG0002G21930 ... | 8 | |
Tree-based ortholog | 1-to-many | EG0002G33270 EG0007G19070 | 2 | ||
Anchor point | many-to-many | EG0002G02990 EG0002G33270 EG0003G01660 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G33270 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G07590 FV0G30340 FV0G42140 ... | 7 | |
Tree-based ortholog | 1-to-1 | FV4G22040 | 1 | ||
Anchor point | many-to-many | FV4G22040 FV5G05950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G22040 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G03870 GM02G03820 GM02G09480 ... | 15 | |
Tree-based ortholog | 1-to-many | GM01G03870 GM02G03820 GM08G39870 ... | 4 | ||
Anchor point | many-to-many | GM06G19590 GM13G01420 GM02G03820 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G39870 GM18G18590 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G07050 GR04G10350 GR04G18340 ... | 9 | |
Tree-based ortholog | 1-to-1 | GR05G18380 | 1 | ||
Anchor point | many-to-1 | GR05G18380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G18380 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G006050 LJ2G023930 LJ3G021510 ... | 6 | |
Tree-based ortholog | 1-to-1 | LJ2G023930 | 1 | ||
Anchor point | many-to-many | LJ2G023930 LJ1G006050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G023930 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G189940 MD00G231080 MD00G301160 ... | 10 | |
Tree-based ortholog | 1-to-1 | MD00G231080 | 1 | ||
Anchor point | many-to-many | MD13G006310 MD16G004970 MD14G018140 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G006310 MD16G004970 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02906G00090 ME03352G00020 ME04083G00240 ... | 8 | |
Tree-based ortholog | 1-to-many | ME02906G00090 ME03352G00020 | 2 | ||
Anchor point | many-to-many | ME12794G01230 ME04083G00240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03352G00020 ME02906G00090 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G032730 MT1G109620 MT3G078210 ... | 8 | |
Tree-based ortholog | 1-to-1 | MT8G063790 | 1 | ||
Anchor point | many-to-many | MT3G078210 MT8G063790 MT5G034670 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G063790 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G53000 OS01G54560 OS02G54820 ... | 10 | |
Tree-based ortholog | 1-to-many | OS09G20990 OS05G03810 OS12G32130 ... | 5 | ||
Anchor point | many-to-many | OS09G20990 OS02G54820 OS08G31980 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS09G20990 OS08G31980 | 2 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G02440 | 1 | |
Tree-based ortholog | 1-to-1 | OL12G02440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G02440 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00080G00490 PP00081G01040 PP00088G00870 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00088G00870 PP00081G01040 PP00080G00490 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00081G01040 PP00153G00410 PP00080G00490 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G13950 PT03G09450 PT04G06150 ... | 10 | |
Tree-based ortholog | 1-to-many | PT15G07400 PT12G07850 | 2 | ||
Anchor point | many-to-many | PT15G07400 PT12G07850 PT06G17550 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G07400 PT12G07850 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G08880 PPE_001G26730 PPE_001G34360 ... | 7 | |
Tree-based ortholog | 1-to-1 | PPE_001G26730 | 1 | ||
Anchor point | many-to-many | PPE_001G26730 PPE_001G08880 PPE_005G18220 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G26730 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28863G00010 RC29883G00900 RC30026G00330 ... | 5 | |
Tree-based ortholog | 1-to-1 | RC29883G00900 | 1 | ||
Anchor point | many-to-1 | RC30147G06510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29883G00900 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G005210 SL02G072150 SL04G025940 ... | 8 | |
Tree-based ortholog | 1-to-many | SL04G025940 SL05G005750 | 2 | ||
Anchor point | many-to-many | SL04G025940 SL05G005750 SL07G006500 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G005750 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G005320 ST01G033790 ST02G018720 ... | 11 | |
Tree-based ortholog | 1-to-many | ST04G015360 ST05G012970 ST05G013030 ... | 4 | ||
Anchor point | many-to-many | ST05G012840 ST04G015360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G015360 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G05170 TP1G21220 TP2G04510 ... | 6 | |
Tree-based ortholog | 1-to-1 | TP1G21220 | 1 | ||
Anchor point | many-to-many | TP2G04510 TP1G21220 TP5G25400 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G21220 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G24560 TC0002G30860 TC0003G00800 ... | 6 | |
Tree-based ortholog | 1-to-1 | TC0002G24560 | 1 | ||
Anchor point | many-to-many | TC0003G00800 TC0002G24560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G24560 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G05680 VV01G13760 VV03G07660 ... | 6 | |
Tree-based ortholog | 1-to-1 | VV01G13760 | 1 | ||
Anchor point | many-to-many | VV17G02050 VV01G13760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV12G03240 VV10G02510 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G08410 ZM01G37720 ZM01G39130 ... | 13 | |
Tree-based ortholog | 1-to-many | ZM07G12930 ZM02G30010 ZM01G39130 ... | 4 | ||
Anchor point | many-to-many | ZM07G12930 ZM01G39130 ZM04G26220 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G13350 ZM01G39130 | 2 |