Integrative Orthology Viewer: AT1G23760 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G23760 AT1G60390 AT1G70370 | 3 | |
Tree-based ortholog | AT1G23760 | 1 | ||
Anchor point | AT1G70370 AT1G60390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G23760 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00058G01590 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00058G01590 | 1 | ||
Anchor point | many-to-1 | ATR_00058G01590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00058G01590 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G25570 AL2G05770 AL2G18810 | 3 | |
Tree-based ortholog | 1-to-1 | AL1G25570 | 1 | ||
Anchor point | many-to-many | AL2G18810 AL1G25570 AL2G05770 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G25570 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV5G02790 BV6G09860 | 2 | |
Tree-based ortholog | 1-to-1 | BV6G09860 | 1 | ||
Anchor point | many-to-many | BV6G09860 BV5G02790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G09860 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR07G26940 BR09G14750 | 2 | |
Tree-based ortholog | 1-to-1 | BR07G26940 | 1 | ||
Anchor point | many-to-many | BR07G26940 BR09G14750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G26940 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G22340 CRU_002G04660 CRU_002G16120 | 3 | |
Tree-based ortholog | 1-to-1 | CRU_001G22340 | 1 | ||
Anchor point | many-to-many | CRU_002G04660 CRU_001G22340 CRU_002G16120 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G22340 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00069G00320 CP00069G00350 CP00069G00380 ... | 4 | |
Tree-based ortholog | 1-to-many | CP00069G00370 CP00069G00350 CP00069G00380 ... | 5 | ||
Anchor point | many-to-many | CP00124G00380 CP00069G00320 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00069G00320 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL00G05370 CL06G17500 | 2 | |
Tree-based ortholog | 1-to-1 | CL00G05370 | 1 | ||
Anchor point | many-to-many | CL00G05370 CL06G17500 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL00G05370 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G02600 CS00003G02610 CS00020G01540 | 3 | |
Tree-based ortholog | 1-to-many | CS00003G02610 CS02725G00010 CS00003G02600 | 3 | ||
Anchor point | many-to-many | CS00003G02600 CS00020G01540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G02600 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00014G00030 CM00030G00200 | 2 | |
Tree-based ortholog | 1-to-1 | CM00014G00030 | 1 | ||
Anchor point | many-to-many | CM00030G00200 CM00014G00030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G00030 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G03100 EG0002G27620 EG0008G21070 | 3 | |
Tree-based ortholog | 1-to-many | EG0008G21070 EG0002G27620 | 2 | ||
Anchor point | many-to-many | EG0008G21070 EG0002G27510 EG0002G03100 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G21070 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV4G21740 FV5G06060 | 2 | |
Tree-based ortholog | 1-to-1 | FV4G21740 | 1 | ||
Anchor point | many-to-many | FV4G21740 FV5G06060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G21740 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G03760 GM02G03960 GM04G35360 ... | 9 | |
Tree-based ortholog | 1-to-many | GM18G18980 GM08G39700 GM18G19040 ... | 5 | ||
Anchor point | many-to-many | GM06G19480 GM01G03760 GM02G03960 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G03760 GM02G03960 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G16140 GR05G13630 GR05G18260 | 3 | |
Tree-based ortholog | 1-to-many | GR02G16140 GR05G18260 | 2 | ||
Anchor point | many-to-many | GR02G16140 GR05G18260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G18260 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G005750 LJ2G024320 | 2 | |
Tree-based ortholog | 1-to-1 | LJ2G024320 | 1 | ||
Anchor point | many-to-many | LJ1G005750 LJ2G024320 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G024320 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G437550 MD06G014390 MD13G006530 ... | 4 | |
Tree-based ortholog | 1-to-many | MD16G005110 MD13G006530 | 2 | ||
Anchor point | many-to-many | MD06G014390 MD16G005110 MD13G006530 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G005110 MD13G006530 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04083G00170 ME05378G00080 ME06715G00390 ... | 5 | |
Tree-based ortholog | 1-to-1 | ME06715G00400 | 1 | ||
Anchor point | many-to-many | ME04083G00170 ME09880G00010 ME06715G00390 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09880G00010 ME06715G00390 ME05378G00080 | 3 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G078090 MT4G133830 MT5G034320 ... | 5 | |
Tree-based ortholog | 1-to-many | MT8G064500 MT8G064530 MT8G064560 ... | 5 | ||
Anchor point | many-to-many | MT8G064500 MT3G078090 MT5G034320 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G034320 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS08G29200 OS09G16010 | 2 | |
Tree-based ortholog | 1-to-many | OS08G29200 OS09G16010 OS10G26940 | 3 | ||
Anchor point | many-to-1 | OS08G29200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G29200 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00015G00120 PP00026G00120 PP00056G00560 ... | 6 | |
Tree-based ortholog | 1-to-many | PP00007G01300 PP00081G01190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00204G00380 PP00056G00560 PP00015G00120 ... | 5 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G19000 PT10G04080 PT10G04090 ... | 4 | |
Tree-based ortholog | 1-to-many | PT10G04080 PT10G04090 PT08G19000 | 3 | ||
Anchor point | many-to-many | PT10G04080 PT12G07920 PT08G19000 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G04090 PT10G04080 PT08G19000 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G26460 PPE_001G26470 PPE_005G18100 | 3 | |
Tree-based ortholog | 1-to-many | PPE_001G26460 PPE_001G26470 | 2 | ||
Anchor point | many-to-many | PPE_001G26460 PPE_005G18100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G26470 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29631G00420 RC30147G06400 | 2 | |
Tree-based ortholog | 1-to-1 | RC29631G00400 | 1 | ||
Anchor point | many-to-many | RC29631G00400 RC30147G06400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29631G00420 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G114240 SL05G005540 SL05G005550 ... | 4 | |
Tree-based ortholog | 1-to-many | SL05G005550 SL05G005540 SL05G005560 | 3 | ||
Anchor point | many-to-many | SL03G114240 SL05G005540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G005560 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G027640 ST05G013170 ST05G013180 ... | 6 | |
Tree-based ortholog | 1-to-many | ST05G013200 ST05G013170 ST05G013180 ... | 5 | ||
Anchor point | many-to-many | ST05G013170 ST03G027640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G013240 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G04420 TP5G25480 | 2 | |
Tree-based ortholog | 1-to-1 | TP5G25480 | 1 | ||
Anchor point | many-to-many | TP2G04420 TP5G25480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G25480 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G24970 TC0003G00970 | 2 | |
Tree-based ortholog | 1-to-1 | TC0002G24970 | 1 | ||
Anchor point | many-to-many | TC0002G24970 TC0003G00970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G24970 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV17G01920 | 1 | |
Tree-based ortholog | 1-to-1 | VV17G01920 | 1 | ||
Anchor point | many-to-1 | VV17G01920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G01920 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G12880 ZM07G11480 | 2 | |
Tree-based ortholog | 1-to-many | ZM04G12880 ZM07G11480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G12880 | 1 |