Integrative Orthology Viewer: AT1G22760 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G22760 AT1G49760 AT1G71770 ... | 5 | |
Tree-based ortholog | AT1G22760 | 1 | ||
Anchor point | AT1G71770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G22760 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00051G00090 ATR_00078G01250 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00078G01250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00078G01250 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G24370 AL1G44100 AL2G20470 ... | 6 | |
Tree-based ortholog | 1-to-1 | AL1G24370 | 1 | ||
Anchor point | 1-to-many | AL1G24370 AL2G20470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G24370 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G13440 BV1G14670 BV9G20150 | 3 | |
Tree-based ortholog | 1-to-1 | BV1G13440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G13440 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G04120 BR02G21060 BR03G39500 ... | 11 | |
Tree-based ortholog | 1-to-1 | BR08G24190 | 1 | ||
Anchor point | 1-to-many | BR07G28000 BR02G21060 BR07G21560 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G28000 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G21360 CRU_002G17460 CRU_004G02470 ... | 5 | |
Tree-based ortholog | 1-to-1 | CRU_001G21360 | 1 | ||
Anchor point | 1-to-many | CRU_002G17460 CRU_001G21360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G21360 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00021G01680 CP00026G01230 CP00055G01130 ... | 4 | |
Tree-based ortholog | 1-to-1 | CP00026G01230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G01230 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G08510 | 1 | |
Tree-based ortholog | 1-to-1 | CR01G08510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G08510 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G06200 CL05G11410 CL08G07050 | 3 | |
Tree-based ortholog | 1-to-1 | CL08G07050 | 1 | ||
Anchor point | 1-to-1 | CL08G07050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G07050 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G01480 CS00002G02680 CS00006G01830 ... | 4 | |
Tree-based ortholog | 1-to-1 | CS00002G01480 | 1 | ||
Anchor point | 1-to-1 | CS00002G01480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G01480 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00034G00670 CM00038G01630 CM00040G01980 | 3 | |
Tree-based ortholog | 1-to-1 | CM00040G01980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00040G01980 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G01680 EG0009G08860 | 2 | |
Tree-based ortholog | 1-to-many | EG0010G11050 EG0001G21650 EG0011G10320 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G08860 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G20780 FV2G33500 FV6G38120 | 3 | |
Tree-based ortholog | 1-to-1 | FV2G20780 | 1 | ||
Anchor point | 1-to-1 | FV2G20780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G20780 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G08480 GM02G11580 GM04G04300 ... | 9 | |
Tree-based ortholog | 1-to-many | GM20G31120 GM02G08480 GM16G27670 | 3 | ||
Anchor point | 1-to-many | GM16G27670 GM20G31120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G31120 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G13490 GR05G10160 GR05G23650 ... | 8 | |
Tree-based ortholog | 1-to-1 | GR10G13440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G13440 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G065680 | 1 | |
Tree-based ortholog | 1-to-many | LJ5G014930 LJ1G067180 LJ5G011620 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G065680 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G005870 MD00G005900 MD00G192030 ... | 10 | |
Tree-based ortholog | 1-to-many | MD00G430500 MD00G413180 MD15G009890 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G430500 MD00G413180 MD15G009890 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00297G00060 ME05471G00050 ME06145G00080 ... | 5 | |
Tree-based ortholog | 1-to-1 | ME06814G00740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06814G00740 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G019150 MT1G097440 MT3G102040 ... | 6 | |
Tree-based ortholog | 1-to-many | MT1G097440 MT6G040070 MT6G040190 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G097440 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G42600 OS06G38980 OS08G22354 ... | 4 | |
Tree-based ortholog | 1-to-1 | OS06G38980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G02700 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL07G03780 | 1 | |
Tree-based ortholog | 1-to-1 | OL07G03780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G04120 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00051G00530 PP00126G00710 PP00257G00450 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00126G00710 PP00051G00530 PP00257G00450 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00281G00330 PP00257G00450 PP00126G00710 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G30400 PT02G06270 PT02G12420 ... | 6 | |
Tree-based ortholog | 1-to-many | PT02G06270 PT05G19850 | 2 | ||
Anchor point | 1-to-many | PT02G06270 PT05G19850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G06270 PT05G19850 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G43730 PPE_008G04810 PPE_008G14860 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_008G04810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G04810 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28644G00100 RC29801G00960 RC30170G01930 | 3 | |
Tree-based ortholog | 1-to-1 | RC28644G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28644G00100 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL00G009040 SL01G107870 SL12G088720 | 3 | |
Tree-based ortholog | 1-to-1 | SL00G009040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL00G009040 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G045020 ST04G026200 ST12G026870 | 3 | |
Tree-based ortholog | 1-to-1 | ST04G026200 | 1 | ||
Anchor point | 1-to-1 | ST04G026200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G026200 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G20270 TP1G36650 TP3G28770 ... | 6 | |
Tree-based ortholog | 1-to-1 | TP1G20270 | 1 | ||
Anchor point | 1-to-many | TP1G20270 TP5G26790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G20270 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G05790 TC0002G09990 TC0008G00340 ... | 4 | |
Tree-based ortholog | 1-to-1 | TC0008G16230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G16230 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G22410 VV03G06400 VV07G05120 ... | 4 | |
Tree-based ortholog | 1-to-1 | VV00G22410 | 1 | ||
Anchor point | 1-to-1 | VV00G22410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G22410 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G06370 ZM02G10740 ZM02G27060 ... | 5 | |
Tree-based ortholog | 1-to-many | ZM01G06370 ZM09G13600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G27060 | 1 |