Integrative Orthology Viewer: AT1G22620 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G17340 AT1G22620 AT3G14205 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | AT1G22620 | 1 | ||
Tree-based ortholog | AT5G20840 AT3G14205 AT1G22620 ... | 5 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G01490 ATR_00106G00080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G01490 | 1 | ||
Tree-based ortholog | many-to-many | ATR_00106G00080 ATR_00003G01490 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G18250 AL1G24210 AL3G15000 ... | 5 | |
Anchor point | N/A | AL1G24210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G24210 | 1 | ||
Tree-based ortholog | many-to-many | AL1G18250 AL3G15000 AL5G10880 ... | 5 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G03480 BV7G02330 BV7G02350 ... | 4 | |
Anchor point | N/A | BV1G03480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G03480 | 1 | ||
Tree-based ortholog | many-to-many | BV7G02330 BV1G03480 BV8G14780 | 3 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G34160 BR02G10430 BR03G09150 ... | 9 | |
Anchor point | N/A | BR08G24210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G24210 | 1 | ||
Tree-based ortholog | many-to-many | BR06G12340 BR10G14500 BR08G24210 ... | 11 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G16310 CRU_001G21200 CRU_003G13210 ... | 5 | |
Anchor point | N/A | CRU_001G21200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G21200 | 1 | ||
Tree-based ortholog | many-to-many | CRU_005G08420 CRU_003G13210 CRU_006G18610 ... | 5 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00025G01790 CP00082G00560 CP03240G00010 | 3 | |
Anchor point | N/A | CP00066G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00066G00110 | 1 | ||
Tree-based ortholog | many-to-many | CP00082G00560 CP00025G01790 | 2 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G11980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G11980 | 1 | ||
Tree-based ortholog | many-to-1 | CR12G11980 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL09G00990 CL11G02560 CL11G02600 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G00990 | 1 | ||
Tree-based ortholog | many-to-1 | CL11G18800 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G02290 CS00013G01840 CS00366G00220 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G02290 | 1 | ||
Tree-based ortholog | many-to-many | CS00002G02290 CS00366G00220 CS00013G01840 | 3 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00008G00020 CM00067G01020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00008G00020 | 1 | ||
Tree-based ortholog | many-to-many | CM00056G00250 CM00008G00020 CM00056G00230 | 3 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G25090 EG0006G25170 EG0009G18050 ... | 4 | |
Anchor point | N/A | EG0006G25170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G25170 | 1 | ||
Tree-based ortholog | many-to-many | EG0010G22600 EG0006G25170 EG0009G18050 ... | 4 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G16520 FV1G11080 FV5G25460 | 3 | |
Anchor point | N/A | FV5G25460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G25460 | 1 | ||
Tree-based ortholog | many-to-many | FV0G16520 FV1G11080 FV5G25460 | 3 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G04901 GM08G26040 GM09G08586 ... | 9 | |
Anchor point | N/A | GM12G00320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G26040 GM12G00320 | 2 | ||
Tree-based ortholog | many-to-many | GM08G26040 GM15G20210 GM13G17490 ... | 11 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G01780 GR05G11580 GR09G14410 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G11580 | 1 | ||
Tree-based ortholog | many-to-many | GR01G01780 GR09G14410 GR10G23590 ... | 7 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ3G035750 LJ3G051870 LJ4G037390 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G037390 | 1 | ||
Tree-based ortholog | many-to-many | LJ4G037390 LJ3G051970 LJ3G035750 | 3 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G322620 MD00G433010 MD02G008520 ... | 8 | |
Anchor point | N/A | MD15G033050 MD08G020780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G033050 | 1 | ||
Tree-based ortholog | many-to-many | MD15G033050 MD14G005250 MD09G016850 ... | 6 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03975G00160 ME05875G01430 ME06700G00320 ... | 5 | |
Anchor point | N/A | ME07851G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07851G00050 | 1 | ||
Tree-based ortholog | many-to-many | ME06700G00320 ME10114G00120 ME07851G00050 ... | 6 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G032925 MT4G032935 MT4G124630 ... | 4 | |
Anchor point | N/A | MT4G032925 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G032925 | 1 | ||
Tree-based ortholog | many-to-many | MT8G022740 MT4G124630 MT4G032935 ... | 4 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G54150 OS03G08430 OS06G09540 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G01750 | 1 | ||
Tree-based ortholog | many-to-many | OS02G54150 OS06G24840 OS06G09540 ... | 4 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G02650 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00050G00610 PP00064G00450 PP00124G00550 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00064G00450 PP00124G00550 PP00050G00610 | 3 | ||
Tree-based ortholog | many-to-many | PP00124G00550 PP00224G00300 PP00050G00610 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G16390 PT03G07130 PT06G13640 ... | 6 | |
Anchor point | N/A | PT13G10790 PT19G08030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT19G08030 | 1 | ||
Tree-based ortholog | many-to-many | PT19G08030 PT01G16390 PT18G06370 ... | 6 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G56240 PPE_003G02130 PPE_007G21200 | 3 | |
Anchor point | N/A | PPE_001G56240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G56240 | 1 | ||
Tree-based ortholog | many-to-many | PPE_003G02130 PPE_001G56240 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29727G00010 RC29739G01250 RC30074G00700 | 3 | |
Anchor point | N/A | RC30074G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30074G00700 | 1 | ||
Tree-based ortholog | many-to-many | RC29727G00010 RC29739G01250 RC30074G00700 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G123520 SL07G017430 SL11G022380 ... | 4 | |
Anchor point | N/A | SL11G022380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G022380 | 1 | ||
Tree-based ortholog | many-to-many | SL12G049540 SL11G022380 SL03G123520 ... | 4 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G034460 ST07G010840 ST11G015060 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G015060 | 1 | ||
Tree-based ortholog | many-to-many | ST07G010840 ST03G034460 ST11G015060 ... | 4 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G15460 TP1G15470 TP1G20130 ... | 6 | |
Anchor point | N/A | TP1G20130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G20130 | 1 | ||
Tree-based ortholog | many-to-many | TP1G15470 TP3G12480 TP6G23690 ... | 6 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0006G12690 TC0008G18870 TC0009G06660 | 3 | |
Anchor point | N/A | TC0008G18870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G18870 | 1 | ||
Tree-based ortholog | many-to-many | TC0006G12690 TC0008G18870 TC0009G06660 | 3 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV09G01860 VV11G01990 VV14G14920 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G14920 | 1 | ||
Tree-based ortholog | many-to-many | VV09G01860 VV11G01990 VV14G14920 | 3 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G05650 ZM05G42590 ZM06G00500 ... | 5 | |
Anchor point | N/A | ZM09G27320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G00500 | 1 | ||
Tree-based ortholog | many-to-many | ZM06G15410 ZM05G42590 ZM06G00500 ... | 4 |