Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G21970
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G21970 | 1 |  |
| Tree-based ortholog | AT1G21970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G21970 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00042G00290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00047G00440 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL0G01950 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G23440 | 1 | ||
| Anchor point | N/A | AL1G23280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL0G01950 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV1G05850 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G13750 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR07G09700 | 1 | |
| Tree-based ortholog | 1-to-many | BR07G09700 BR05G21540 BR08G24450 | 3 | ||
| Anchor point | N/A | BR07G09700 BR08G24450 BR05G21540 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G09700 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G20570 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G20570 | 1 | ||
| Anchor point | N/A | CRU_001G20570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G20570 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00012G01410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G01410 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR07G07070 CR17G09720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G01500 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL10G03750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G03750 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS11684G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G04140 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00021G04450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G04450 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0005G28980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G28980 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G49750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV3G02950 FV3G09960 | 2 | ||
| Glycine max | Tree-based ortholog | 1-to-1 | GM07G29695 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G00950 GM07G39820 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR13G15250 | 1 | |
| Tree-based ortholog | 1-to-many | GR04G03360 GR13G15250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G15250 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G036310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G000590 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G426310 MD00G230620 MD00G382780 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G362270 MD10G027850 MD00G034630 ... | 4 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME02421G01100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02421G01100 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT1G039040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G133952 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS02G49370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G49370 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL04G04920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G04700 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00217G00220 PP00181G00130 PP00288G00190 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00083G01020 PP00462G00050 PP00302G00150 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT16G00560 PT06G00500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G00500 PT16G00560 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G25000 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G25000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G25000 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29629G00200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29629G00200 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL07G065570 SL07G065580 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G015060 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST07G028320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G013350 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G19490 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G19490 | 1 | ||
| Anchor point | N/A | TP1G19490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G19490 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0007G01250 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0007G01250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G01250 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV00G04350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G04350 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G39070 ZM04G23230 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G23230 ZM05G39070 | 2 |