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Integrative Orthology Viewer:
AT1G21400
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G21400 AT5G09300 | 2 |  |
| Tree-based ortholog | AT5G34780 AT1G21400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G21400 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00017G02770 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00017G02770 | 1 | ||
| Anchor point | N/A | ATR_00017G02770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00017G02770 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G22610 AL6G08950 | 2 | |
| Tree-based ortholog | many-to-1 | AL1G22610 | 1 | ||
| Anchor point | N/A | AL1G22610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G22610 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV1G00450 BV6G07450 | 2 | |
| Tree-based ortholog | many-to-1 | BV1G00450 | 1 | ||
| Anchor point | N/A | BV1G00450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G07450 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G03570 BR06G15550 BR08G24710 | 3 | |
| Tree-based ortholog | many-to-1 | BR06G15550 | 1 | ||
| Anchor point | N/A | BR06G15550 BR08G24710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G24710 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G19970 CRU_006G07660 | 2 | |
| Tree-based ortholog | many-to-1 | CRU_001G19970 | 1 | ||
| Anchor point | N/A | CRU_001G19970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G19970 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00026G00700 CP00042G01640 | 2 | |
| Tree-based ortholog | many-to-1 | CP00026G00700 | 1 | ||
| Anchor point | N/A | CP00042G01640 CP00026G00700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G00700 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G17320 | 1 | |
| Tree-based ortholog | many-to-1 | CR12G17320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G17320 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL00G05260 CL01G08620 | 2 | |
| Tree-based ortholog | many-to-1 | CL00G05260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G08620 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00002G00100 CS00200G00130 | 2 | |
| Tree-based ortholog | many-to-1 | CS00002G00100 | 1 | ||
| Anchor point | N/A | CS00002G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G00100 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00007G11040 CM00015G02110 | 2 | |
| Tree-based ortholog | many-to-1 | CM00015G02110 | 1 | ||
| Anchor point | N/A | CM00007G11040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G11040 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G22940 EG0009G01450 | 2 | |
| Tree-based ortholog | many-to-1 | EG0006G22940 | 1 | ||
| Anchor point | N/A | EG0006G22940 EG0009G01450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G22940 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G21170 | 1 | |
| Tree-based ortholog | many-to-1 | FV0G21170 | 1 | ||
| Anchor point | N/A | FV0G21170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G21170 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G39001 GM04G42190 GM06G12610 ... | 4 | |
| Tree-based ortholog | many-to-many | GM04G42190 GM06G12610 | 2 | ||
| Anchor point | N/A | GM06G12610 GM04G42190 GM06G15980 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G12610 GM04G42190 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G08500 GR09G25100 GR12G03600 | 3 | |
| Tree-based ortholog | many-to-1 | GR09G25100 | 1 | ||
| Anchor point | N/A | GR05G08500 GR09G25100 GR12G03600 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G25100 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G035040 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G145640 MD15G007070 MD15G027880 | 3 | |
| Tree-based ortholog | many-to-many | MD00G145640 MD15G007070 MD15G027880 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G007070 MD15G027880 MD00G145640 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03699G00120 ME06948G00750 | 2 | |
| Tree-based ortholog | many-to-1 | ME03699G00120 | 1 | ||
| Anchor point | N/A | ME06948G00750 ME03699G00120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03699G00120 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G088845 MT3G096390 | 2 | |
| Tree-based ortholog | many-to-many | MT8G075470 MT3G088845 | 2 | ||
| Anchor point | N/A | MT3G096390 MT3G088845 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G088845 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS12G08260 | 1 | |
| Tree-based ortholog | many-to-1 | OS12G08260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G08260 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G05670 | 1 | |
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00207G00390 | 1 | |
| Tree-based ortholog | many-to-1 | PP00207G00390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00207G00390 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G07490 PT05G06400 PT05G18540 | 3 | |
| Tree-based ortholog | many-to-many | PT02G07490 PT05G18540 | 2 | ||
| Anchor point | N/A | PT02G07490 PT05G06400 PT05G18540 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G07490 PT05G18540 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_004G30460 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_004G30460 | 1 | ||
| Anchor point | N/A | PPE_004G30460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G30460 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29648G00190 RC29992G00070 | 2 | |
| Tree-based ortholog | many-to-1 | RC29648G00190 | 1 | ||
| Anchor point | N/A | RC29648G00190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29648G00190 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G063350 SL05G056480 SL06G059840 ... | 5 | |
| Tree-based ortholog | many-to-1 | SL10G018430 | 1 | ||
| Anchor point | N/A | SL06G059840 SL04G063350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G063350 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G024960 ST05G029700 ST06G018730 ... | 7 | |
| Tree-based ortholog | many-to-1 | ST06G018730 | 1 | ||
| Anchor point | N/A | ST06G018730 ST04G024960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G024960 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G18950 TP6G34020 | 2 | |
| Tree-based ortholog | many-to-1 | TP1G18950 | 1 | ||
| Anchor point | N/A | TP1G18950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G18950 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G12970 TC0008G13410 TC0008G13420 | 3 | |
| Tree-based ortholog | many-to-1 | TC0008G13420 | 1 | ||
| Anchor point | N/A | TC0001G12970 TC0008G13410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G13420 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G04930 VV18G11210 | 2 | |
| Tree-based ortholog | many-to-1 | VV18G11210 | 1 | ||
| Anchor point | N/A | VV18G11210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G11210 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM10G03830 | 1 | |
| Tree-based ortholog | many-to-1 | ZM10G03830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G03830 | 1 |