Integrative Orthology Viewer: AT1G19970 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G19970 | 1 | |
Tree-based ortholog | AT1G19970 | 1 | ||
Anchor point | AT2G21190 AT4G38790 AT1G75760 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G19970 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00017G00030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00017G00030 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL1G21020 | 1 | |
Anchor point | many-to-many | AL1G21020 AL2G24660 AL4G00300 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G21020 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-many | BV0G61870 BV9G02900 | 2 | |
Anchor point | many-to-many | BV8G10600 BV0G61870 BV9G02900 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G02900 | 1 | ||
Brassica rapa | Tree-based ortholog | 1-to-many | BR08G25310 BR06G14430 BR07G10710 | 3 | |
Anchor point | many-to-many | BR08G20250 BR08G25310 BR09G44780 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G14430 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G18680 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_001G18680 | 1 | ||
Anchor point | many-to-many | CRU_001G18680 CRU_002G21320 CRU_007G00620 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G18680 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00026G00420 | 1 | |
Anchor point | many-to-many | CP00026G00420 CP00037G01940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G00420 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR13G00170 CR01G11050 CR06G15360 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G00170 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL05G19350 | 1 | |
Anchor point | many-to-many | CL05G19350 CL08G14090 CL02G11750 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G19350 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00002G05520 | 1 | |
Anchor point | many-to-1 | CS00002G05520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G05520 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM01596G04710 | 1 | |
Anchor point | many-to-many | CM00014G03730 CM01596G04710 CM00045G00580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G04710 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0006G13490 | 1 | |
Anchor point | many-to-many | EG0009G11090 EG0006G13490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G13490 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G38590 | 1 | |
Anchor point | many-to-1 | FV2G38590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G38590 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM04G02651 GM06G02680 GM03G09070 | 3 | |
Anchor point | many-to-many | GM04G02651 GM06G02680 GM04G00760 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G02680 GM11G10390 GM04G00760 ... | 4 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR10G00430 | 1 | |
Anchor point | many-to-many | GR08G03340 GR02G19260 GR10G00430 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G19260 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G042670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G042670 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD00G298160 MD05G019870 MD00G368910 | 3 | |
Anchor point | many-to-1 | MD05G019870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G298160 MD05G019870 | 2 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME07012G00520 ME02943G00250 | 2 | |
Anchor point | many-to-many | ME07012G00520 ME02943G00250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME07012G00520 ME02943G00250 | 2 | ||
Medicago truncatula | Tree-based ortholog | 1-to-1 | MT3G113920 | 1 | |
Anchor point | many-to-1 | MT3G113920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G075550 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS08G43470 OS09G36370 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G36370 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL05G00400 | 1 | |
Tree-based ortholog | 1-to-many | OL05G00400 OL02G02570 OL02G02580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00400 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00195G00300 PP00442G00110 PP00280G00260 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00280G00260 PP00442G00110 PP00195G00300 | 3 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT02G02230 PT00G00020 | 2 | |
Anchor point | many-to-many | PT04G16740 PT02G02230 PT09G12890 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G02230 | 1 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_008G17740 | 1 | |
Anchor point | many-to-1 | PPE_008G17740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G17740 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC30170G05410 | 1 | |
Anchor point | many-to-1 | RC30170G05410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29711G00130 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL01G111090 SL10G054850 | 2 | |
Anchor point | many-to-many | SL10G054850 SL01G111090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G054850 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST01G048500 | 1 | |
Anchor point | many-to-1 | ST01G048500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G048500 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP1G17760 | 1 | |
Anchor point | many-to-many | TP7G37030 TP1G17760 TP4G00350 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G17760 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0008G04270 | 1 | |
Anchor point | many-to-many | TC0002G06480 TC0008G04270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G06480 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV03G05380 | 1 | |
Tree-based ortholog | 1-to-1 | VV18G10560 | 1 | ||
Anchor point | many-to-many | VV18G10560 VV03G05380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G10560 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM07G20500 ZM02G34160 ZM01G37030 ... | 4 | |
Anchor point | many-to-many | ZM01G37030 ZM02G34160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G34160 ZM07G20500 | 2 |