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Integrative Orthology Viewer:
AT1G19440
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G01120 AT1G19440 AT1G25450 ... | 15 |  |
| Tree-based ortholog | AT1G19440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G19440 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00002G05340 ATR_00007G03790 ATR_00014G00920 ... | 7 | |
| Tree-based ortholog | 1-to-1 | ATR_00014G00920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00014G00920 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G01250 AL1G03550 AL1G20510 ... | 16 | |
| Tree-based ortholog | 1-to-1 | AL1G20510 | 1 | ||
| Anchor point | N/A | AL7G06430 AL1G20510 AL3G40210 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G20510 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G15160 BV0G58150 BV0G78940 ... | 10 | |
| Tree-based ortholog | 1-to-1 | BV9G13430 | 1 | ||
| Anchor point | N/A | BV9G13430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G13430 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G06970 BR01G03890 BR03G39730 ... | 22 | |
| Tree-based ortholog | 1-to-1 | BR06G13950 | 1 | ||
| Anchor point | N/A | BR09G45640 BR06G13950 BR10G18050 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G45640 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G00990 CRU_001G03130 CRU_001G18210 ... | 16 | |
| Tree-based ortholog | 1-to-1 | CRU_001G18210 | 1 | ||
| Anchor point | N/A | CRU_003G28870 CRU_001G18210 CRU_007G05460 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G18210 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00019G00310 CP00058G00040 CP00058G00050 ... | 9 | |
| Tree-based ortholog | 1-to-1 | CP00062G01540 | 1 | ||
| Anchor point | N/A | CP00062G01540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00062G01540 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR17G05760 | 1 | |
| Tree-based ortholog | 1-to-1 | CR17G05760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G05760 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL05G00600 CL05G05210 CL05G17190 ... | 6 | |
| Tree-based ortholog | 1-to-many | CL08G14790 CL02G05120 | 2 | ||
| Anchor point | N/A | CL08G14790 CL02G05120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G14790 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G04930 CS00002G04290 CS00005G03250 ... | 14 | |
| Tree-based ortholog | 1-to-many | CS00250G00010 CS00002G04290 | 2 | ||
| Anchor point | N/A | CS00002G04290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G04290 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00006G00620 CM00006G05870 CM00014G02970 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CM00014G02970 | 1 | ||
| Anchor point | N/A | CM00014G02970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G02970 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G14400 EG0003G24940 EG0003G32220 ... | 17 | |
| Tree-based ortholog | 1-to-1 | EG0009G10220 | 1 | ||
| Anchor point | N/A | EG0009G10220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G32220 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G01700 FV1G06340 FV2G01850 ... | 8 | |
| Tree-based ortholog | 1-to-many | FV2G01850 FV2G50830 | 2 | ||
| Anchor point | N/A | FV2G50830 FV2G01850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G01850 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G00380 GM03G42140 GM04G06110 ... | 21 | |
| Tree-based ortholog | 1-to-many | GM06G01460 GM14G08080 GM17G36940 | 3 | ||
| Anchor point | N/A | GM06G01460 GM14G08080 GM17G36940 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM14G08080 GM17G36940 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G15090 GR02G00550 GR02G00560 ... | 17 | |
| Tree-based ortholog | 1-to-many | GR05G24410 GR05G10800 GR09G20160 ... | 6 | ||
| Anchor point | N/A | GR05G10800 GR09G20160 GR10G09390 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G20160 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G025400 LJ1G031030 LJ1G074940 ... | 7 | |
| Tree-based ortholog | 1-to-1 | LJ1G031030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G031030 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G009130 MD00G015990 MD00G039820 ... | 21 | |
| Tree-based ortholog | 1-to-many | MD08G002730 MD08G016950 MD00G279990 ... | 10 | ||
| Anchor point | N/A | MD08G002730 MD12G015800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G015990 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01313G00010 ME01463G00010 ME01551G01520 ... | 19 | |
| Tree-based ortholog | 1-to-many | ME06028G00490 ME02978G00100 ME07012G01220 | 3 | ||
| Anchor point | N/A | ME02978G00100 ME07012G01220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02978G00100 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G041085 MT1G076430 MT1G110930 ... | 16 | |
| Tree-based ortholog | 1-to-1 | MT4G070270 | 1 | ||
| Anchor point | N/A | MT4G070270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G070270 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G34560 OS02G11070 OS02G49920 ... | 16 | |
| Tree-based ortholog | 1-to-1 | OS05G49290 | 1 | ||
| Anchor point | N/A | OS10G33370 OS02G56860 OS02G49920 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G49290 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00007G01460 PP00008G00460 PP00021G00410 ... | 13 | |
| Tree-based ortholog | 1-to-many | PP00007G01460 PP00028G00180 PP00034G01640 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00007G01460 PP00034G01640 PP00028G00180 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G17800 PT04G15560 PT06G08040 ... | 20 | |
| Tree-based ortholog | 1-to-many | PT04G15560 PT09G11670 PT14G19620 | 3 | ||
| Anchor point | N/A | PT09G11670 PT14G19620 PT04G15560 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G11670 PT04G15560 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G02520 PPE_001G32010 PPE_001G38680 ... | 8 | |
| Tree-based ortholog | 1-to-many | PPE_008G11450 PPE_001G38680 | 2 | ||
| Anchor point | N/A | PPE_008G11450 PPE_001G38680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G38680 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27524G00120 RC27964G00170 RC29739G00850 ... | 10 | |
| Tree-based ortholog | 1-to-many | RC30190G00730 RC30170G04020 | 2 | ||
| Anchor point | N/A | RC30170G04020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G04020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G063140 SL03G005320 SL04G080450 ... | 15 | |
| Tree-based ortholog | 1-to-1 | SL04G080450 | 1 | ||
| Anchor point | N/A | SL04G080450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G080450 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G010830 ST02G029020 ST03G005540 ... | 17 | |
| Tree-based ortholog | 1-to-1 | ST04G033810 | 1 | ||
| Anchor point | N/A | ST04G033810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G033810 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G01150 TP1G03040 TP1G17330 ... | 16 | |
| Tree-based ortholog | 1-to-1 | TP1G17330 | 1 | ||
| Anchor point | N/A | TP1G17330 TP3G29500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G17330 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G33290 TC0002G08060 TC0002G23080 ... | 13 | |
| Tree-based ortholog | 1-to-many | TC0002G08060 TC0008G02640 | 2 | ||
| Anchor point | N/A | TC0008G02640 TC0002G08060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G02640 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G09190 VV04G11420 VV09G10390 ... | 5 | |
| Tree-based ortholog | 1-to-1 | VV03G08560 | 1 | ||
| Anchor point | N/A | VV15G07320 VV03G08560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G05920 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G04410 ZM01G05590 ZM01G08220 ... | 20 | |
| Tree-based ortholog | 1-to-many | ZM08G10840 ZM06G31500 | 2 | ||
| Anchor point | N/A | ZM06G31500 ZM01G42320 ZM05G43910 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G31500 ZM08G10840 | 2 |