Integrative Orthology Viewer: AT1G14790 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G14790 AT4G11130 | 2 | |
Tree-based ortholog | AT1G14790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G14790 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00088G00110 ATR_00176G00150 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00176G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00176G00150 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G15640 AL6G33660 AL7G33480 | 3 | |
Tree-based ortholog | 1-to-many | AL1G15640 AL7G33480 | 2 | ||
Anchor point | N/A | AL1G15640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL1G15640 AL7G33480 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G18470 BV5G02600 | 2 | |
Tree-based ortholog | 1-to-1 | BV2G18470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G18470 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G10290 BR08G10190 | 2 | |
Tree-based ortholog | 1-to-1 | BR06G10290 | 1 | ||
Anchor point | N/A | BR06G10290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G10290 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G13960 CRU_006G28850 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_001G13960 | 1 | ||
Anchor point | N/A | CRU_001G13960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G13960 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00002G01670 CP00002G01730 CP00124G00250 | 3 | |
Tree-based ortholog | 1-to-1 | CP00002G01730 | 1 | ||
Anchor point | N/A | CP00002G01660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00002G01730 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G06260 CL01G06400 CL06G17430 ... | 5 | |
Tree-based ortholog | 1-to-1 | CL07G05440 | 1 | ||
Anchor point | N/A | CL07G05440 CL01G06260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G08910 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00020G01690 CS00058G00260 CS00183G00060 | 3 | |
Tree-based ortholog | 1-to-many | CS00183G00060 CS00168G00060 | 2 | ||
Anchor point | N/A | CS00058G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00058G00260 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G02030 CM00005G02360 CM00030G00280 ... | 4 | |
Tree-based ortholog | 1-to-many | CM00108G00120 CM00005G02360 CM00005G02030 | 3 | ||
Anchor point | N/A | CM00005G02030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00108G00120 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G21900 EG0007G15750 EG0007G15780 ... | 6 | |
Tree-based ortholog | 1-to-many | EG0007G15810 EG0007G15750 EG0734G00010 ... | 5 | ||
Anchor point | N/A | EG0007G15750 EG0002G21860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G15810 EG0007G15750 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G07620 FV0G07640 FV0G07700 ... | 5 | |
Tree-based ortholog | 1-to-many | FV0G07620 FV0G07640 FV0G07650 ... | 5 | ||
Anchor point | N/A | FV0G07620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G07620 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G09470 GM05G02000 GM07G26900 ... | 4 | |
Tree-based ortholog | 1-to-1 | GM02G09470 | 1 | ||
Anchor point | N/A | GM02G09470 GM07G26900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM02G09470 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR08G29690 GR12G18390 GR13G02900 | 3 | |
Tree-based ortholog | 1-to-many | GR09G35250 GR02G19640 GR13G02900 | 3 | ||
Anchor point | N/A | GR13G02900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G02900 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G028010 | 1 | |
Tree-based ortholog | 1-to-many | LJ1G026830 LJ4G028010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G028010 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G049930 MD00G073610 MD00G355040 ... | 7 | |
Tree-based ortholog | 1-to-many | MD10G001030 MD10G001040 MD00G397470 ... | 11 | ||
Anchor point | N/A | MD13G001140 MD10G001030 MD13G002680 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD10G001050 MD13G001140 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME10173G00790 | 1 | |
Tree-based ortholog | 1-to-1 | ME10173G00790 | 1 | ||
Anchor point | N/A | ME10173G00790 ME08847G00290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10173G00790 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G032590 MT1G032610 MT1G032630 ... | 5 | |
Tree-based ortholog | 1-to-many | MT1G032630 MT1G032610 MT1G032720 ... | 5 | ||
Anchor point | N/A | MT1G032590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT1G032610 MT1G032720 MT1G032630 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G50330 OS04G39160 | 2 | |
Tree-based ortholog | 1-to-1 | OS02G50330 | 1 | ||
Anchor point | N/A | OS02G50330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G50330 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00178G00470 | 1 | |
Tree-based ortholog | 1-to-many | PP00495G00020 PP00178G00470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00178G00470 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G13580 PT08G13610 PT10G10490 ... | 5 | |
Tree-based ortholog | 1-to-1 | PT08G13580 | 1 | ||
Anchor point | N/A | PT10G10490 PT08G13580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G13610 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G12410 PPE_001G34120 PPE_001G34320 ... | 7 | |
Tree-based ortholog | 1-to-many | PPE_001G34320 PPE_001G34120 PPE_001G12410 ... | 6 | ||
Anchor point | N/A | PPE_001G34120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_001G34120 PPE_001G34320 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30147G06540 | 1 | |
Tree-based ortholog | 1-to-many | RC29848G01870 RC30147G06540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G06540 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G114140 SL05G007510 | 2 | |
Tree-based ortholog | 1-to-1 | SL05G007510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G007510 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G027500 ST05G010490 ST05G010500 | 3 | |
Tree-based ortholog | 1-to-many | ST05G010500 ST05G010490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST05G010490 ST05G010500 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G13230 TP6G06280 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G13230 | 1 | ||
Anchor point | N/A | TP1G13230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G13230 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G30940 TC0002G30950 TC0003G00760 | 3 | |
Tree-based ortholog | 1-to-1 | TC0002G30940 | 1 | ||
Anchor point | N/A | TC0002G30940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G30940 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV17G02080 | 1 | |
Tree-based ortholog | 1-to-1 | VV01G05760 | 1 | ||
Anchor point | N/A | VV01G05770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G02080 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G12900 ZM05G39590 ZM09G16230 | 3 | |
Tree-based ortholog | 1-to-1 | ZM05G39590 | 1 | ||
Anchor point | N/A | ZM05G39580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G39590 | 1 |