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Integrative Orthology Viewer:
AT1G12910
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G12910 AT3G26640 | 2 |  |
| Tree-based ortholog | AT1G12910 | 1 | ||
| Anchor point | AT3G26640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G12910 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G04910 ATR_00016G03020 ATR_00040G00980 | 3 | |
| Tree-based ortholog | 1-to-1 | ATR_00016G03020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G03020 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G13540 AL5G05310 | 2 | |
| Tree-based ortholog | 1-to-1 | AL1G13540 | 1 | ||
| Anchor point | 1-to-many | AL5G05310 AL1G13540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G13540 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G00060 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR09G49400 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G49400 | 1 | ||
| Anchor point | 1-to-many | BR06G08170 BR09G49400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G49400 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G12070 CRU_005G04240 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_001G12070 | 1 | ||
| Anchor point | 1-to-many | CRU_005G04240 CRU_001G12070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G12070 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00003G01630 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00003G01630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G01630 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G10620 | 1 | |
| Tree-based ortholog | 1-to-1 | CR16G10620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G10620 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G14220 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G14220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G14220 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00011G02680 CS00041G00640 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00041G00640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00041G00640 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00023G00130 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00023G00130 | 1 | ||
| Anchor point | 1-to-1 | CM00023G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00023G00130 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G11330 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0009G12900 | 1 | ||
| Anchor point | 1-to-1 | EG0009G12900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G11330 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G52050 | 1 | |
| Anchor point | 1-to-1 | FV6G52050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G52050 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM16G04930 GM19G28250 | 2 | |
| Tree-based ortholog | 1-to-many | GM19G28250 GM16G04930 | 2 | ||
| Anchor point | 1-to-1 | GM19G28250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G04930 GM19G28250 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G12940 GR11G15580 | 2 | |
| Tree-based ortholog | 1-to-many | GR05G12940 GR11G15580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G15580 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G053280 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G053280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G053280 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G038960 MD00G134770 MD00G410300 ... | 6 | |
| Tree-based ortholog | 1-to-1 | MD00G331570 | 1 | ||
| Anchor point | 1-to-many | MD09G000180 MD17G000020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G038960 MD00G410300 MD00G134770 ... | 6 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME06446G00010 ME12262G00130 | 2 | |
| Tree-based ortholog | 1-to-many | ME12262G00130 ME06446G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06446G00010 ME12262G00130 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G084810 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G084810 | 1 | ||
| Anchor point | 1-to-1 | MT7G084810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G084810 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G32430 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G32430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G32430 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL04G01730 | 1 | |
| Tree-based ortholog | 1-to-1 | OL04G01730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G01730 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00092G00020 PP00174G00400 PP00179G00250 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00174G00400 PP00179G00250 PP00092G00020 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00092G00020 PP00290G00030 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G21470 PT02G22050 PT14G14070 | 3 | |
| Tree-based ortholog | 1-to-many | PT02G21470 PT02G22050 PT14G14070 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G21470 PT14G14070 PT02G22050 | 3 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_003G29230 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_003G29230 | 1 | ||
| Anchor point | 1-to-1 | PPE_003G29230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G29230 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30131G00700 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30131G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G00700 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G082470 | 1 | |
| Tree-based ortholog | 1-to-1 | SL04G082470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G082470 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G035920 | 1 | |
| Tree-based ortholog | 1-to-1 | ST04G035920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G035920 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G11480 TP2G15760 | 2 | |
| Tree-based ortholog | 1-to-1 | TP1G11480 | 1 | ||
| Anchor point | 1-to-many | TP2G15760 TP1G11480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G11480 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G05260 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G05260 | 1 | ||
| Anchor point | 1-to-1 | TC0004G05260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G05260 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV14G13280 | 1 | |
| Tree-based ortholog | 1-to-1 | VV14G13280 | 1 | ||
| Anchor point | 1-to-1 | VV14G13280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G12350 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM05G29460 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM05G29460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G29460 | 1 |