Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G12560
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G12560 | 1 |  |
| Anchor point | AT1G62980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G12560 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00001G00820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G00820 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G12930 | 1 | |
| Anchor point | 1-to-many | AL1G12930 AL2G02400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G12930 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G08380 | 1 | |
| Anchor point | 1-to-1 | BV5G08380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G08380 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G08400 BR08G28150 BR09G49580 | 3 | |
| Anchor point | 1-to-many | BR08G28150 BR09G49580 BR06G08400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR08G28150 BR06G08400 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G11630 | 1 | |
| Anchor point | 1-to-many | CRU_002G01910 CRU_001G11630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G11630 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00029G00370 | 1 | |
| Anchor point | 1-to-1 | CP00029G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00029G00370 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR04G04450 CR03G02810 CR08G06220 ... | 7 | |
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL01G03100 CL10G03340 | 2 | |
| Anchor point | 1-to-1 | CL01G03100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G03100 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-many | CS00040G00510 CS00040G00520 | 2 | |
| Anchor point | 1-to-1 | CS00040G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00040G00510 CS00040G00520 | 2 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00005G05830 CM00021G03320 | 2 | |
| Anchor point | 1-to-many | CM00005G05830 CM00021G03320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G05830 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0004G15780 EG0005G04600 | 2 | |
| Anchor point | 1-to-many | EG0004G15780 EG0005G04600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0004G15780 EG0005G04600 | 2 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV1G30210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G30210 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM01G42370 GM11G03000 GM17G14230 | 3 | |
| Anchor point | 1-to-many | GM17G14230 GM01G42370 GM11G03000 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G42370 GM11G03000 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR04G20610 GR06G21080 GR07G02200 | 3 | |
| Anchor point | 1-to-many | GR04G20610 GR06G21080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G02200 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-many | LJ2G035450 LJ4G023530 | 2 | |
| Anchor point | 1-to-many | LJ2G035450 LJ4G023530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G023530 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G128040 MD00G420860 MD10G003240 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G128040 MD00G420860 MD10G003240 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME07035G00560 | 1 | |
| Anchor point | 1-to-1 | ME07035G00560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07035G00560 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT4G102450 MT5G011210 | 2 | |
| Anchor point | 1-to-many | MT5G011210 MT4G102450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G011210 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS10G39110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G39110 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00052G00500 | 1 | |
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT01G11290 | 1 | |
| Anchor point | 1-to-1 | PT01G11290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G11290 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G09570 | 1 | |
| Anchor point | 1-to-1 | PPE_005G09570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G09570 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30190G02590 | 1 | |
| Anchor point | 1-to-1 | RC30190G02590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G02590 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL08G080060 | 1 | |
| Anchor point | 1-to-many | SL08G080060 SL08G007780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G080060 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST08G026100 | 1 | |
| Anchor point | 1-to-1 | ST08G005800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G026100 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G11150 | 1 | |
| Anchor point | 1-to-many | TP1G11150 TP2G01610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G11150 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G26450 | 1 | |
| Anchor point | 1-to-1 | TC0003G26450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G26450 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV02G07520 | 1 | |
| Anchor point | 1-to-1 | VV02G07520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G07520 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM09G20060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G20060 | 1 |