Integrative Orthology Viewer: AT1G10570 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G10570 AT1G60220 | 2 | |
Tree-based ortholog | AT1G10570 | 1 | ||
Anchor point | AT1G60220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G10570 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00058G01500 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00058G01500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00058G01500 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G10540 AL2G05880 | 2 | |
Tree-based ortholog | 1-to-1 | AL1G10540 | 1 | ||
Anchor point | 1-to-many | AL2G05880 AL1G10540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G10540 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G09920 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G09920 | 1 | ||
Anchor point | 1-to-1 | BV6G09920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G09920 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G06920 BR09G14780 | 2 | |
Tree-based ortholog | 1-to-1 | BR06G06920 | 1 | ||
Anchor point | 1-to-many | BR09G14780 BR06G06920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G06920 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G09570 CRU_002G04760 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_001G09570 | 1 | ||
Anchor point | 1-to-many | CRU_001G09570 CRU_002G04760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G09570 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00069G00220 | 1 | |
Tree-based ortholog | 1-to-1 | CP00069G00220 | 1 | ||
Anchor point | 1-to-1 | CP00069G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00069G00220 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G07560 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G07560 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G26210 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G26210 | 1 | ||
Anchor point | 1-to-1 | CL05G26210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G26210 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00003G02670 | 1 | |
Tree-based ortholog | 1-to-1 | CS00003G02670 | 1 | ||
Anchor point | 1-to-1 | CS00003G02670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G02670 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G03170 | 1 | |
Tree-based ortholog | 1-to-1 | CM00016G03170 | 1 | ||
Anchor point | 1-to-1 | CM00016G03170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G03170 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G21110 | 1 | |
Tree-based ortholog | 1-to-1 | EG0008G21110 | 1 | ||
Anchor point | 1-to-1 | EG0008G21110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G21110 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV4G21830 | 1 | |
Tree-based ortholog | 1-to-1 | FV4G21830 | 1 | ||
Anchor point | 1-to-1 | FV4G21830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G21830 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G39731 GM18G18951 | 2 | |
Tree-based ortholog | 1-to-many | GM08G39731 GM18G18951 | 2 | ||
Anchor point | 1-to-1 | GM18G18951 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM18G18951 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G17140 | 1 | |
Tree-based ortholog | 1-to-1 | GR12G17140 | 1 | ||
Anchor point | 1-to-1 | GR12G17140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G17140 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G018630 | 1 | |
Malus domestica | Tree-based ortholog | 1-to-many | MD08G018690 MD00G129530 MD15G030350 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G012160 MD00G394550 MD13G015540 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06715G00330 ME09880G00040 | 2 | |
Tree-based ortholog | 1-to-many | ME06715G00330 ME09880G00040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06715G00330 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT8G064470 | 1 | |
Tree-based ortholog | 1-to-1 | MT8G064470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G064470 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G29310 | 1 | |
Tree-based ortholog | 1-to-1 | OS06G29310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G29310 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL12G01370 | 1 | |
Tree-based ortholog | 1-to-1 | OL12G01370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G01370 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00193G00280 PP00199G00230 PP00088G01020 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00199G00230 PP00093G00580 PP00193G00280 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT10G04060 | 1 | |
Tree-based ortholog | 1-to-1 | PT10G04060 | 1 | ||
Anchor point | 1-to-1 | PT10G04060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G04060 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G26560 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_004G31410 | 1 | ||
Anchor point | 1-to-1 | PPE_001G26560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G26560 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29631G00150 | 1 | |
Tree-based ortholog | 1-to-1 | RC29631G00150 | 1 | ||
Anchor point | 1-to-1 | RC29631G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29631G00150 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G026200 SL05G005630 | 2 | |
Tree-based ortholog | 1-to-many | SL05G005630 SL04G026200 | 2 | ||
Anchor point | 1-to-1 | SL05G005630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G005630 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G015920 ST05G013310 | 2 | |
Tree-based ortholog | 1-to-many | ST05G013310 ST04G015920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G013310 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G09220 TP2G04460 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G09220 | 1 | ||
Anchor point | 1-to-many | TP1G09220 TP2G04460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G09220 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G24800 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G24800 | 1 | ||
Anchor point | 1-to-1 | TC0002G24800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G24800 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV01G13930 | 1 | |
Tree-based ortholog | 1-to-many | VV01G13930 VV01G13920 | 2 | ||
Anchor point | 1-to-1 | VV01G13930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G13930 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G29020 ZM03G32420 ZM04G40370 ... | 4 | |
Tree-based ortholog | 1-to-1 | ZM09G09420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G29020 ZM03G02090 | 2 |