Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G08510
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G08510 | 1 |  |
| Tree-based ortholog | AT1G08510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G08510 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00142G00730 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00142G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G00020 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G08170 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G08170 | 1 | ||
| Anchor point | N/A | AL1G08170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G08170 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G03810 | 1 | |
| Tree-based ortholog | 1-to-1 | BV8G03810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G03810 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G05270 BR08G29740 BR09G51550 | 3 | |
| Tree-based ortholog | 1-to-many | BR06G05270 BR08G29740 | 2 | ||
| Anchor point | N/A | BR09G51550 BR06G05270 BR08G29740 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G51550 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G07460 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G07460 | 1 | ||
| Anchor point | N/A | CRU_001G07460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G07460 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00065G00870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00065G00870 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR06G01910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G01910 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL06G11000 CL11G16390 | 2 | |
| Tree-based ortholog | 1-to-many | CL11G16390 CL06G11000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G11000 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00005G03510 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00005G03510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00005G03510 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00003G06730 CM00077G00260 | 2 | |
| Tree-based ortholog | 1-to-many | CM00003G06730 CM00077G00260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00077G00260 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0003G08930 EG0003G32050 | 2 | |
| Tree-based ortholog | 1-to-many | EG0003G32050 EG0003G08930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0003G08930 EG0003G32050 | 2 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV1G06570 | 1 | |
| Tree-based ortholog | 1-to-1 | FV1G06570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G06570 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G21910 GM05G08060 GM06G23560 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM06G23560 GM04G21910 GM05G08060 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G08060 GM17G12940 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR01G00330 GR04G27930 GR10G06850 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR04G27930 GR01G00330 GR10G06850 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G06850 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G046790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G046790 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G301450 MD02G004170 MD15G011810 | 3 | |
| Tree-based ortholog | 1-to-many | MD02G004170 MD00G301450 MD15G011810 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G011810 MD02G004170 MD00G301450 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME05656G00120 ME11361G00010 | 2 | |
| Tree-based ortholog | 1-to-many | ME11361G00010 ME05656G00120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05656G00120 ME11361G00010 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G112970 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G112970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G112970 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS02G43090 OS06G05130 OS06G39520 ... | 4 | |
| Tree-based ortholog | 1-to-many | OS06G39520 OS02G43090 OS11G43820 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G05130 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G06760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G06760 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00003G01000 PP00121G00080 PP00167G00580 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00167G00580 PP00003G01000 PP00121G00080 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00121G00080 PP00433G00190 PP00003G01000 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G14830 PT06G15580 PT06G15720 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT06G15580 PT06G15720 PT18G07270 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT18G07270 PT06G15720 PT06G15580 | 3 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G25300 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_007G25300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G25300 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29848G02310 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29848G02310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29848G02310 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL12G006930 | 1 | |
| Tree-based ortholog | 1-to-1 | SL12G006930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G006930 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST12G010500 | 1 | |
| Tree-based ortholog | 1-to-1 | ST12G010500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G010500 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G07170 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G07170 | 1 | ||
| Anchor point | N/A | TP1G07170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G07170 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0009G11090 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0009G11090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G11090 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV11G05720 | 1 | |
| Tree-based ortholog | 1-to-1 | VV11G05720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G05720 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM06G08290 ZM06G14300 ZM09G05040 ... | 4 | |
| Tree-based ortholog | 1-to-many | ZM06G14300 ZM09G13370 ZM01G21230 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G08290 ZM09G05040 | 2 |