Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G05060
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G05060 | 1 |  |
| Tree-based ortholog | AT1G05060 | 1 | ||
| Anchor point | AT2G32650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G05060 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-many | ATR_00112G00210 ATR_00112G00220 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00112G00220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00112G00220 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G04530 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G04530 | 1 | ||
| Anchor point | 1-to-many | AL4G17730 AL1G04530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G04530 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G04600 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G04600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G04600 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G26480 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G26480 | 1 | ||
| Anchor point | 1-to-many | BR05G11920 BR04G19390 BR05G11550 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G26480 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G03990 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G03990 | 1 | ||
| Anchor point | 1-to-many | CRU_004G13540 CRU_001G03990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G03990 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00132G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00132G00030 | 1 | ||
| Anchor point | 1-to-1 | CP00132G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00132G00030 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G02160 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G02160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G02160 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00126G00060 | 1 | |
| Anchor point | 1-to-1 | CS00126G00060 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00034G04720 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00034G04720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G04720 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G08860 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G08860 | 1 | ||
| Anchor point | 1-to-many | EG0001G08860 EG0011G06490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G08860 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G50500 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G50500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G50500 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G43830 GM14G05090 | 2 | |
| Tree-based ortholog | 1-to-many | GM02G43830 GM14G05090 | 2 | ||
| Anchor point | 1-to-many | GM02G43810 GM14G05090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G43830 GM14G05090 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR07G17110 | 1 | |
| Tree-based ortholog | 1-to-1 | GR07G17110 | 1 | ||
| Anchor point | 1-to-1 | GR07G17110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G17110 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G044160 | 1 | |
| Anchor point | 1-to-1 | LJ2G044160 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G209500 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G209500 | 1 | ||
| Anchor point | 1-to-1 | MD09G008050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G209500 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03667G00150 | 1 | |
| Tree-based ortholog | 1-to-1 | ME03667G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03667G00150 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT5G085980 | 1 | |
| Tree-based ortholog | 1-to-1 | MT5G085980 | 1 | ||
| Anchor point | 1-to-1 | MT5G085980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G085980 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G13220 | 1 | |
| Tree-based ortholog | 1-to-1 | OS06G13220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G13220 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00049G00400 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00049G00400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00049G00400 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT14G15670 | 1 | |
| Tree-based ortholog | 1-to-1 | PT14G15670 | 1 | ||
| Anchor point | 1-to-1 | PT14G15670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G15670 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_003G19280 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_003G19280 | 1 | ||
| Anchor point | 1-to-1 | PPE_003G19260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G19280 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29948G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29948G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29948G00040 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL07G049200 | 1 | |
| Tree-based ortholog | 1-to-1 | SL07G049200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G049200 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST07G018370 | 1 | |
| Tree-based ortholog | 1-to-1 | ST07G018370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G018370 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G03930 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G03930 | 1 | ||
| Anchor point | 1-to-many | TP4G14970 TP1G03930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G03930 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G17480 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G17480 | 1 | ||
| Anchor point | 1-to-1 | TC0001G17480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G17480 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV12G11220 | 1 | |
| Tree-based ortholog | 1-to-1 | VV12G11220 | 1 | ||
| Anchor point | 1-to-1 | VV12G11220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G11220 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM06G16930 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM06G16930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G16930 | 1 |